KEGG   Chitinophaga sp. XS-30: FW415_24560
Entry
FW415_24560       CDS       T06207                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
chit  Chitinophaga sp. XS-30
Pathway
chit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FW415_24560 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chit03019]
    FW415_24560 (rny)
Messenger RNA biogenesis [BR:chit03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FW415_24560 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD HDOD KH_1 KH_KhpA-B AAA_15
Other DBs
NCBI-ProteinID: QEH43843
UniProt: A0A5B9WTY3
LinkDB
Position
6094222..6095778
AA seq 518 aa
MTELIIVGVVALAIGILLGKLIFAKNTQRKIQEAEDQAKRIVAEGQLSAETLKKDKLLEA
KEKYLQMKSEHEKEVLQRNQKISESENRIKQKEQGLNQKTEQLQKQVAENESIKENLGRQ
IELVNIKRSELEKHQEEHIRRLEKVAALSAEEARQQLVESLKEEARSQAMSHIQEIIEDA
KTKANKEAKKIIIQSIQRTAAENTIENAITVFNLESDEIKGQIIGREGRNIRAIEAATGV
DLIVDDTPEAIVLSSFDPLRREIARLSLQRLVQDGRIHPARIEEVVEKTKRQLEEQVMEI
GERTVIELGIHGLHKELVRMVGKMRFRSSYGQNLLMHSKETANLCAVMAAELGLNPKLAK
RAGLLHDIGKVPDEESELSHALLGAKLAEKYGEHPAIVNAIGAHHDEMEMAYVISPIVQA
CDAISGARPGARREIMQSYLQRIKDLENLALAYDGVEKAYAIQAGRELRVIVESEKVTDS
DADRLSFEIANKIQNEMQYPGQIKVTVIRERRAVNVAR
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgacagaacttatcatagtgggcgtcgtagctctcgctatcggtatattgcttggaaag
ttgattttcgctaaaaacacccagaggaaaatacaggaagcagaagatcaggccaaaagg
attgttgcagagggccagctttccgccgaaacattaaagaaagacaaactgctggaagcg
aaggagaaatatcttcagatgaaatccgagcacgagaaagaagtactgcagcgtaaccag
aagatctcggaatccgagaaccgcatcaagcaaaaagaacaaggccttaaccagaaaacc
gagcagctccagaaacaggtagcggagaacgaatccatcaaggagaacctcggccgccag
atagaactggtgaacatcaaacgttccgaactggaaaaacaccaggaagagcacatccgc
cgcctggagaaagttgcggccctgtccgccgaagaggcccgccagcaactggtggaaagc
ctgaaagaagaagcccgctcccaggctatgagccacatccaggagatcatcgaggatgcc
aagaccaaagccaacaaggaagccaaaaagatcatcatacaatccatccagcgtaccgcc
gccgaaaacaccatcgagaacgccattaccgtgttcaacctggaaagcgacgagatcaaa
ggccagatcatcggccgggaaggccgtaacatccgtgccattgaagcggctacgggtgtg
gacctgatcgtggacgataccccggaagccatcgtgctttcttccttcgaccccctgcgc
cgcgagatcgcccgcctgagcctgcaacgcctggtacaggacggccgtatccaccccgca
cgtatcgaggaagttgtggaaaagaccaaacgccagctggaagaacaggtgatggaaatc
ggggaaaggaccgtgatagagctgggcatccacggtctgcacaaagaactggtgcgtatg
gtcggcaaaatgcgcttccgctcctcttacggccagaacctgttgatgcactccaaggaa
accgccaacctttgcgccgtgatggccgcggaactgggcctcaatcccaagctcgccaaa
cgcgccggcctcctgcacgatatcggcaaagtgcctgatgaagaatccgaactgagccac
gccctcctcggcgccaagctcgctgaaaaatacggcgaacatcctgccatcgtgaacgcc
atcggcgcacaccacgatgaaatggaaatggcctacgtgatctcccccatcgttcaggcc
tgtgacgccatcagcggcgcccgccccggcgcccgccgcgagatcatgcaaagctacctg
caaaggatcaaagacctggaaaacctcgccctcgcttacgatggcgtggaaaaagcatat
gccatccaggccggccgcgaactgcgcgtgatcgtggaaagcgaaaaagtaaccgacagc
gatgcagaccgcctcagcttcgagatcgccaacaagatccagaacgaaatgcaatatccc
ggacagatcaaagtaaccgttatccgtgaacggagagcggtgaacgttgcccggtaa

DBGET integrated database retrieval system