Chitinibacter bivalviorum: HQ393_00105
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Entry
HQ393_00105 CDS
T06696
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
chiz
Chitinibacter bivalviorum
Pathway
chiz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chiz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HQ393_00105 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chiz03400
]
HQ393_00105 (uvrB)
DNA repair and recombination proteins [BR:
chiz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HQ393_00105 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HQ393_00105 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
AAA_22
AAA_33
DALR_1
Ish1
HH_RND_rel
Motif
Other DBs
NCBI-ProteinID:
QLG86768
UniProt:
A0A7H9BF06
LinkDB
All DBs
Position
complement(18543..20561)
Genome browser
AA seq
672 aa
AA seq
DB search
MFVEYPDSPYQLFQPFPPAGDQPTAINQLIEGLDDGLRFQTLLGVTGSGKTFTMANVIAR
TGRPAIILAPNKTLAAQLYAEMREFFPRNAVEYFVSYYDYYQPEAYVPSRDLFIEKDSAI
NEHIEQMRLSATKAMLERKDCIIVATVSAIYGIGDPSSYHAMILHLVEGEQIGQRDIIKR
LTTMQYDRNELDFSRGHFRVRGDVIDIFPAESAELAVRVSMFDDEIERISLFDPLTGHVK
QRVGRYTIFPSSHYVTPRDTVMRAIETIKDELRDRLAFYYKEQKLVEAQRLEQRTRFDLE
MLTEMGFCKGIENYSRHFSGKPAGSPPPTLLDYLPKDGLMILDESHVMIGQVGAMYKGDR
SRKENLVDYGFRLPSAMDNRPLKFEEFERLMPQTIFVSATPADYEAKNQGQVVEQVVRPT
GLVDPIIEVRPVGTQVDDLLSEIKLRTAVGERVLVTTLTKKMSEQLTDYLAEHGIKVRYL
HSDIDTVERVEILRDLRLGVFDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNLNGKAILYADRITNSMEKAIGETLRRRDKQIAFNVANNITPRGVVKRIKDI
IDGVYNAEEATAARLEEKKQRIVAEMDQKTLAKELKRIEKEMMNAAQNLEFEKAAQLRDE
LKQLRDRAFGHE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgaatatcccgactcgccgtatcaactatttcagcccttcccgcccgcaggc
gatcagccgactgcaattaatcagttgatcgaggggctggacgatggtttgcgctttcaa
actttgctcggcgtaacgggctcgggcaagacctttacgatggccaatgtgattgcgcgc
accggccggccggcgattattttggcgccgaataaaacgctggcggcgcagttgtacgcc
gagatgcgcgagtttttcccgcgcaacgcggtcgagtatttcgtgagttattacgattac
taccagcccgaagcctatgtgcctagccgtgatctgtttatcgaaaaagattcggcgatt
aatgagcatatcgagcaaatgcgcttgagtgcgaccaaggcgatgctggagcgcaaagac
tgcattatcgttgcgaccgtatcggcgatttacggtataggcgaccctagctcgtatcac
gcgatgattttgcatctggtcgagggcgagcaaattggccagcgcgacatcatcaaacgc
ctgacgacgatgcagtacgaccgcaatgaactggacttttcgcgcgggcattttcgcgtg
cgtggtgatgtaatagatattttccccgccgagtcggccgagctcgcggtgcgggtatca
atgttcgacgacgaaatcgagcgcatcagcctgtttgacccgctcaccggccatgtaaag
cagcgcgtaggcaggtatacgattttccccagcagccactatgtcacgccgcgcgatacc
gtcatgcgcgcgattgaaacgatcaaagacgagctacgtgatcggctggcgttttattac
aaagagcaaaaattggttgaggcgcaaaggctggagcagcgcacgcggttcgatctggaa
atgctcaccgaaatgggcttttgcaaaggcatcgagaactactcgcggcatttttctggc
aaacccgcaggctcgccgccgccgacgctgctcgactatctgcccaaagatggcctgatg
attttggacgaaagccacgtaatgatcggccaagtcggcgcgatgtataagggcgatcgc
tcgcgcaaggaaaacctcgtcgattacggcttccgcctgccctccgcaatggacaatcgc
ccgctcaaatttgaagaattcgagcggctgatgccgcaaacaattttcgtctccgccaca
cccgccgattatgaggcgaaaaaccaaggccaagtggtcgaacaagtcgtgcgcccgacg
gggctggtcgatccgatcatcgaagtgcgcccagtcggcacgcaagtggatgatctgcta
tccgaaatcaagctgcgcaccgccgtcggcgagcgcgtgttggtcacgacactgaccaaa
aaaatgtccgagcagctcaccgattatctggccgaacatggcattaaggtgcgctattta
cactcggatattgatactgtagagcgcgtcgaaattttgcgcgatttgcgcctaggcgtg
tttgacgtactgatcgggattaacttattgcgcgaaggcttggatattcctgaggtgtcg
ctggtggcgattttggatgccgacaaggaaggtttcctgcgcagcgagcgcagcctgatt
caaaccatcggccgtgcggcacgtaatctgaacggtaaagcgattttgtacgccgaccgc
attaccaattcaatggaaaaagcgattggtgaaaccctgcgccgccgcgacaaacagatt
gcatttaatgtcgccaacaacatcacaccacgcggcgtagtgaaacgaattaaagatatc
atcgacggcgtgtataacgcagaagaagccacagcagcgcggctggaggagaaaaagcag
cgcattgtggccgagatggatcagaaaacactagcgaaagagctcaagcgtatcgaaaaa
gaaatgatgaacgccgcgcaaaatctggaatttgaaaaggccgcgcaattgcgtgatgag
ctgaagcaacttcgtgatcgggcctttggccatgaataa
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