Chitinibacter bivalviorum: HQ393_05370
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Entry
HQ393_05370 CDS
T06696
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chiz
Chitinibacter bivalviorum
Pathway
chiz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chiz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HQ393_05370 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chiz03019
]
HQ393_05370 (pnp)
03016 Transfer RNA biogenesis [BR:
chiz03016
]
HQ393_05370 (pnp)
Enzymes [BR:
chiz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HQ393_05370 (pnp)
Messenger RNA biogenesis [BR:
chiz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HQ393_05370 (pnp)
Transfer RNA biogenesis [BR:
chiz03016
]
Prokaryotic type
tRNA degradation factors
HQ393_05370 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_TP0910
KH_2
S1_RRP5
OB_PDCD11
LKAAEAR
PTPRR_N
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QLG87730
UniProt:
A0A7H9BG87
LinkDB
All DBs
Position
complement(1142017..1144161)
Genome browser
AA seq
714 aa
AA seq
DB search
MFNKISKSFAFGKHNVTIETGEIARQATGAVMVNMDDTCVLVTVVAARDVKPGQDFFPLT
VDYQERTYAAGKIPGGFFKREGKPSEKEVLTSRLIDRPIRPLFPEGFYNDIQIIATVMSI
NPEVDSDIPAMIGASAALMISGVPFDGPIGAARVGYINGEYVLCPDLSEMKDSQMDLVVA
GTSQAVLMVESEANELSESVMLGAVVFGHEQMQAAINAINELADEVNPELMDWTPPAKNE
ELIAKVRAIAAEGVAQAFKLRHKQVRTQKINETWALVKAALITEETGTLEANEIKSIFKG
LEAEIVRGQILAGEPRIDGRDTRTVRPISIRTGVLPRAHGSVLFTRGETQAIAAATLGTK
LDEQKIDALHGGYTDSFMLHYNFPPYSTGETGRVGVPKRREIGHGRLAKRALVAMLPNKE
DFAYSMRVVSEITESNGSSSMASVCGGCLALMDAGVPMKNHVAGIAMGLIKEGSAFAVLS
DILGDEDHLGDMDFKVAGTENGITALQMDIKITGITKEIMSVALDQAKEGRVHIIGIMKG
ALDGAREEVSEHAPRLYTMKINPEKIRDVIGKGGSVIRSLTEETGTQIDISEDGTITIAS
ISAEGATEARRRIEEITAEVEIGRIYEGPVVKILDKNVGAIVSIMPGKDGLVHISQIANE
RISNVADHLQEGQIVRVKVIEQDEKGRIRLSIKAVLNDEAPAAAAPAEEAPAAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaataaaatcagcaaatcttttgccttcggcaaacacaatgtcaccatcgaaact
ggtgaaatcgcacgtcaagcaactggcgcagtgatggttaacatggatgacacttgtgtc
ctcgttactgttgttgctgcgcgcgatgtaaaacctggccaagattttttcccgctgact
gttgattaccaagagcgcacttatgctgctggtaaaattcctggcggtttcttcaagcgc
gaaggcaagccaagcgaaaaagaagtattgacgagccgtttgatcgaccgtcctattcgt
ccgttgttcccggaaggtttctacaacgacatccaaatcattgcgactgtaatgtcgatt
aatccagaagtggattctgacatcccagccatgatcggcgcgtctgctgcgttaatgatt
tctggcgtaccatttgatggcccgattggcgctgcacgcgtgggctacatcaatggcgag
tatgtgttgtgtccagatctgtcagaaatgaaagacagccagatggatctggtggtagct
ggtactagccaagccgtattgatggttgagtcagaagccaatgaattgtcagaaagcgtg
atgttgggcgcggtggtgttcggccacgagcaaatgcaagcggccatcaatgcaatcaac
gaattggccgatgaagtaaatccagagttgatggattggactcctccagcaaaaaatgaa
gaattgatcgcaaaagtgcgtgcgattgctgctgaaggcgttgcccaggcgttcaaactg
cgccataaacaagttcgtacgcagaaaattaacgaaacttgggctttggtaaaagcggca
ttgatcactgaagaaacgggtacgcttgaagccaatgaaattaaatcaattttcaaaggc
ttagaagctgaaatcgtacgtggccaaattttggccggcgaaccacgtattgatggccgc
gatactcgtacggtacgtcctatttcgatccgtactggcgtgctgccacgtgcgcatggt
tctgtgctattcactcgtggtgaaacgcaagccattgctgctgcaaccttgggtactaag
ctggacgagcaaaaaattgatgcattgcacggcggttatactgatagcttcatgctgcat
tacaacttccctccatactctactggcgaaacaggccgcgtaggcgtgccaaagcgtcgt
gagattggtcatggtcgtttggctaagcgtgctttagttgccatgctgccaaacaaagaa
gacttcgcttactcaatgcgcgttgtatctgaaattacagaatcaaatggttcgtcttct
atggcatcggtgtgtggcggttgcttggcactgatggacgctggtgtgccgatgaaaaac
cacgttgctggtatcgcaatgggtttgatcaaagaaggtagtgcattcgctgtgctgtcg
gacatcttgggcgatgaagatcaccttggcgacatggactttaaagtggcaggtactgaa
aacggtattactgcgctgcaaatggacatcaagatcactggcattactaaagaaattatg
tctgttgcgctcgatcaagccaaagaaggtcgcgtacacattatcggcatcatgaaaggc
gctctggatggtgcacgtgaagaagtgagtgaacatgcgccacgtctttacacgatgaag
atcaatccagaaaaaattcgtgatgtgattggtaaaggtggttcagtgattcgttcgttg
accgaagaaactggcacgcaaatcgatattagcgaagatggcacgattacgatcgcttct
atttctgctgaaggtgccacagaagctcgccgtcgcatcgaagaaattaccgccgaagtt
gaaatcgggcgtatttacgaaggtccagtcgtaaaaatcttggacaaaaacgtaggtgca
atcgtatcaattatgcctggtaaagatggcttggttcatattagccaaatcgctaatgag
cgcatttctaatgttgctgatcacttgcaagaaggtcaaattgtgcgtgtgaaagtgatc
gaacaagatgaaaaaggtcgtattcgcttgtcgatcaaagctgtattgaatgatgaggca
cctgctgcggccgctccggctgaagaggctcctgctgcggaatga
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