Chitinibacter bivalviorum: HQ393_10495
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Entry
HQ393_10495 CDS
T06696
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
chiz
Chitinibacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
chiz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chiz01011
]
HQ393_10495
Enzymes [BR:
chiz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HQ393_10495
Peptidoglycan biosynthesis and degradation proteins [BR:
chiz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HQ393_10495
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_OapA
NMB0315_dom_I
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
QLG88633
UniProt:
A0A7H9BJ12
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Position
2220007..2221551
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AA seq
514 aa
AA seq
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MKLRLCATLFTAFLSLPALAIESGKLDYELHSITPPLSANTQAVIDQLFSEANPLIERDL
WVRVRNGFAIPDIDSPLVTKWENYYSSRPDYLNRIIERSNRYLYYVVGEVERRNMPMEFA
LLPMIESAYNPRAESPAKAAGMWQFIPDTGKRYGLERTMWYDGRRDVVAATDAALSYLQD
IHGMFDDWQLALASYNWGENAVKRAIDKNIAAGLPTAFVDLKMPDETRNYVPKLLAIRNI
IADPAAYGVKLSAIPNQPYFATLQPGKHMDVSVAAKLAGISVDELLKLNPGFIRPVIAHK
DERKLVLPVAQVPVFERNLAAYDQPLLNWQPYVTKHGDRVEDLASTFGISEDQLRDINDI
GSKERVAAGKMILVPKVAGIDISERQTLAALHENRNGEAIDTGEKDTPKPVIKVARDGSH
GREHKVAKGDTLFNIAKRYDLSVAELKAMNNLKGNQVALGESLTVGNASNAPKSYVVKRG
DTLASIAKKLNIDLYELKKSNRKPISPGMILVMN
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccgcctgtgcgctactctctttaccgccttcctctcactaccagcgttggcc
atcgaatctggcaagctcgactacgaattacacagtattacccctccgctctcagccaat
acccaggccgtcattgatcagttgtttagtgaggccaacccgctgatcgagcgtgattta
tgggtgcgagtgcgcaacggctttgcgattcccgatattgatagcccgctggtaacaaag
tgggaaaattactattccagccgccccgattatttaaatcgcattatcgagcgcagtaat
cgctatctctattatgtggtcggtgaggttgagcgccgcaatatgccgatggagtttgcg
ctattgccgatgattgaatcggcttacaacccacgtgcagaatcccccgctaaagcggcg
ggtatgtggcaatttattcccgacaccggcaaacgttatggtcttgagcgcacgatgtgg
tacgacgggcgccgcgatgtggttgccgccaccgatgccgcactgagctatttgcaagac
atccacggcatgtttgacgattggcaactggcgctggcgtcatacaactggggtgaaaac
gccgtaaaacgcgccatcgacaaaaacattgctgcgggcttacccacggcctttgtcgat
ctgaaaatgcccgatgagacgcgcaattacgtccccaaattgctggccattcgcaacatc
attgccgacccagcagcctatggcgtcaaactatctgcgatcccgaatcagccctatttt
gctaccttgcaaccgggcaagcacatggatgtgtcggtcgccgccaagctggcaggcatt
agtgttgatgaattactgaagctcaaccccggctttatccggccggtgattgcgcataaa
gatgaacgcaaactcgtactccccgtcgcgcaagtccctgttttcgagcgcaacttagcc
gcctatgatcagccgctgttaaattggcagccatatgtcaccaaacatggtgatcgcgtt
gaggatttggcgagcacgtttggcattagcgaagatcagctacgcgacatcaatgacatt
ggcagcaaagagcgcgtggctgcgggcaaaatgatcttggtgcctaaagtcgcgggcatt
gatatttctgagcgccaaacgctggctgcgctgcatgaaaaccgcaacggtgaagccatt
gataccggtgaaaaagacacgcctaagcctgtgatcaaagtcgcacgtgatggcagtcat
ggccgtgagcataaggtggccaaaggcgatacgctgtttaatatcgccaaacgctatgat
ttgagcgtagcggaattgaaagcgatgaataacctcaagggcaatcaagtggccttgggt
gaatcgctcaccgttggcaatgccagcaatgcgcccaagtcgtacgtggtcaaacgtggt
gatacgctggcgtcgattgcgaaaaaactcaatatcgatctgtatgagctgaaaaaatcc
aatcgcaaacccatctcaccggggatgatcttggtaatgaactaa
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