Chitinibacter bivalviorum: HQ393_11210
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Entry
HQ393_11210 CDS
T06696
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
chiz
Chitinibacter bivalviorum
Brite
KEGG Orthology (KO) [BR:
chiz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chiz03016
]
HQ393_11210
Enzymes [BR:
chiz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HQ393_11210
Transfer RNA biogenesis [BR:
chiz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HQ393_11210
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QLG88756
UniProt:
A0A7H9BKA6
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Position
2374341..2376191
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AA seq
616 aa
AA seq
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MNVFYEEDGSFKVASINDEQAASMQVEDARGKRSKIKTANVLLRFDRISLDDFYKTAQTL
AEEIDVNFLWECCGTDEFGFADIAAEYFGANPNLSQQAAAAIALHGSPMYFYRKGKGRYK
AAPEENLKAAIAGLERKAREAEQIAAWEADLLAGILPQALQEKLHRLIHRPDKNSLEYKA
LAQAADSAQMSPLRLLEKNGAIPDVAQYHLDAFLSEHFPKGRGFPAAEPVFAPEDLPLAD
VEAFSIDDATTTEIDDAFSLKKLPNGNWQVGIHIAAPVLGILPGTTLDQVVLDRLSTVYF
PGDKITMLPDDAVEVFTLQEGAARPAVSMYLEVSLGYDILNHRSVIERVPVVANLRHHDI
EPFFNEETAGQDGPDYQWKSELTFLWHLAGALEGRRGKADQVGPVRLDYSFYIDREEGQP
ERVRIVPRKRGAPMDKLVAELMILVNSQWGANLRDAQIAGIYRSQGGGRVKLSTQPTAHA
GLGVECYMWSSSPLRRAVDFINQQQLVAMLKGEKPRYQKNDAELFTAISSFDAAYAAYAD
FQDKMERYWCIRYLEQENMREFTAQVIKENLVRVDGMPLVLRVGGLPELPAGTTVSLQRL
KIDYLELAVEARIATI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttttacgaggaagatggcagctttaaagtcgccagcatcaatgatgagcag
gctgccagcatgcaggtggaagacgcgcgcggcaaacgcagcaaaattaaaacggcgaac
gtactgttgcgttttgaccgcataagcctagatgacttttataaaacagcccaaacactg
gcggaagaaatcgacgtcaacttcctatgggaatgttgtggcacggatgaatttggcttt
gccgacatcgctgccgaatattttggcgccaacccgaatctaagtcagcaagccgcagca
gccatcgcgctgcatggctcgccgatgtatttctatcgcaaaggcaaaggccgctacaaa
gcagcccccgaagaaaacctcaaagctgcgattgcaggtctggaacgcaaagcgcgcgaa
gccgagcaaatagccgcatgggaagccgatctattggcgggtatattgccacaagccttg
caagaaaagcttcacagactaatacatcgcccagataaaaatagcctcgaatataaagcc
cttgcccaagcagccgacagcgcgcaaatgtcgccgctgcgtttgctcgagaaaaatggc
gcgattcccgatgtggcgcaataccatctggatgccttcctgagcgagcatttccctaaa
gggcgtggttttcccgctgccgagccagtattcgcacctgaagatttgccactggccgac
gtcgaagccttctcgattgacgacgcgaccaccaccgaaattgacgatgcgtttagtctg
aaaaaattgccgaatggtaactggcaagttggcatccatattgccgcgcccgtgctgggt
attttgccgggcacgacgctcgatcaagtcgtgctcgatcgcttgtcgaccgtgtatttt
cccggcgacaaaattacgatgctgcctgatgacgccgttgaggtattcacactgcaagaa
ggtgcggcacgccctgcggtgtcgatgtacctcgaagtctcgctgggctacgatattctg
aatcatcgttcggtgatcgagcgtgtgccagtggtcgccaatttgcgccaccacgacatc
gagcctttctttaatgaagaaacagcgggccaagacgggccggattaccaatggaaatcc
gagctgactttcctgtggcatttggccggagcactcgaaggccgtcgcggtaaagctgat
caggttggcccagttcgacttgattacagcttttatattgatcgcgaagagggtcagccc
gaacgcgttcgcatcgtgccgcgcaaacgcggcgcgccgatggataagcttgtcgccgag
ctgatgattctggttaatagccaatggggcgcaaacctgcgtgacgcgcaaatcgccggc
atttaccgctcgcaaggcggtggccgcgtgaaactctcaacccaaccaacggcccacgct
ggcttgggtgttgaatgctatatgtggtccagctcgccgctgcgccgcgcggtggacttc
atcaatcagcaacaattagttgcgatgctcaagggtgaaaagccgcgctatcagaagaac
gacgccgagttattcaccgcgatttcgtcatttgacgccgcctatgccgcttatgcagat
tttcaggacaaaatggagcgctattggtgcatccgttatctagaacaagagaatatgcgt
gagtttacggcgcaagtgatcaaggaaaatttggtgcgcgtcgatggcatgcctttggtc
ttgcgcgtgggcggcttgccggaactgccggcgggaacaacagtctcactacagcgactc
aagattgattatctggagctagcagtggaagctcgaatcgccacgatttaa
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