Chitinibacter bivalviorum: HQ393_13950
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Entry
HQ393_13950 CDS
T06696
Name
(GenBank) retention module-containing protein
Organism
chiz
Chitinibacter bivalviorum
Pathway
chiz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chiz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HQ393_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Cadherin_3
Ig_SibA
CshA_repeat
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
QLG89256
UniProt:
A0A7H9BLL0
LinkDB
All DBs
Position
2929542..2939327
Genome browser
AA seq
3261 aa
AA seq
DB search
MAETIIGSSNSAKAITVVEGEAFIRDASGKVSPVAAGDVLQEGQVIFTSSTGHVTLLLPN
GQVLELGADRNLLLDGDVTASAPTDPTEALVANAGSSADQIINAINAGKDLSEELDATAA
GLNAGAGGEDGHGFVRLLRIAEAVDPVSFEFKTELNPVHDSIEPAANPAAVVLLPENQQP
VGQNQSATTPEDTPVRGQAIAQDSDGDVLSYSKSSDPAHGTVTVDGKGAWVYTPNKDFNG
NDSFTILVDDGKGGKDTITVNVGVTPVNDPPVLVDANGQPLGNDMAVSTPEDTPVSGKLD
AKDPDGDTLTFSKTSDPAHGSVTVDPNGGWTYTPNKDYNGPDSFTVLVDDGKGGKDTITV
NVGVTPVNDPPVPVDPKVPGESFDPATGNYSHTTPEDTAVSGKVIATDKDGDTLTYTLNS
QPTHGTVVFKADGSYTYTPSADYNGKDSFTVLVDDGHGGKVTSTVNIDVTPVNDPPVPVD
PKVPGETFDPATGNYSHTTPEDTAVSGKVIATDKDGDTLTYTLNSQPTHGTVVFKADGSY
TYTPGQDYNGKDSFTVLVDDGHGGKVTSTVNIDITPVNDAPDAINDTTSTAINTPVVNVN
VLGNDKDVDGDTLTVTKAELADTTKGTVTLNADGTINFTPATNVTGPVVVNYTISDGHGG
TDTAQLTINVGANTPPTGADKTLTLAEDTNVTVKASDFGFSDADAGQTLSAVRIDSLPAN
GQLTLNGAAVTAGQEISVLDLNAGKLVFTPAADANGNNYANFTFSVKDSSGAFDTVPNKV
TFDVTPVNDTPTPVDPKVPGETFDPASGNYSHTTPEDTAVSGKVTATDKDGDTLTYTLNS
QPAHGTVVFKADGSYTYTPSQDYNGKDSFTVLVDDGHGGKVTSTVNIDVTPVNDPPVPVD
PKVPGESFDPATGNYSHTTPEDTAVSGKVIATDKDGDTLTYTLNSQPTHGTVVFKADGSY
TYTPSADYNGKDSFTVLVDDGHGGKVTSTVNIDVTPVNDPPVPVDPKVPGETFDPATGNY
SHTTPEDTAVSGKVIATDKDGDTLTYTLNSQPTHGTVVFKADGSYTYTPGQDYNGKDSFT
VLVDDGHGGKVTSTVNIDITPVNDAPDAINDTTSTAINTPVVNVNVLGNDKDVDGDTLTV
TKAELADTTKGTVTLNADGTINFTPATNVTGPVVVNYTISDGHGGTDTAQLTINVGANTP
PTGADKTLTLAEDTNVTVKASDFGFSDADAGQTLSAVRIDSLPANGQLTLNGAAVTAGQE
ISVLDLNAGKLVFTPAADANGNNYANFTFSVKDSSGAFDTVPNKVTFDVTPVNDTPTPVD
PKVPGETFDPASGNYSHTTPEDTAVSGKVTATDKDGDTLTYTLNSQPAHGTVVFKADGSY
TYTPSQDYNGKDSFTVLVDDGHGGKVTSTVNIDVTPVNDPPVPVDPKVPGESFDPATGNY
SHTTPEDTAVSGKVIATDKDGDTLTYTLNSQPTHGTVVFKADGSYTYTPSADYNGKDSFT
VLVDDGHGGKVTSTVNIDVTPVNDPPVPVDPKVPGETFDPATGNYSHTTPEDTAVSGKVI
ATDKDGDTLTYTLNSQPTHGTVVFKADGSYTYTPGQDYNGKDSFTVLVDDGHGGKVTSTV
NIDITPVNDAPDAINDTTSTAINTPVVNVNVLGNDKDVDGDTLTVTKAELADTTKGTVTL
NADGTINFTPATNVTGPVVVNYTISDGHGGTDTAQLTINVGANTPPTGADKTLTLAEDTN
VTVKASDFGFSDADAGQTLSAVRIDSLPANGQLTLNGAAVTAGQEISVLDLNAGKLVFTP
AADANGNNYANFTFSVKDSSGAFDTVPNKVTFDVTPVNDTPTPVDPKVPGETFDPASGNY
SHTTPEDTAVSGKVTATDKDGDTLTYTLNSQPAHGTVVFKADGSYTYTPSQDYNGKDSFT
VLVDDGHGGKVTSTVNIDVTPVNDPPVPVDPKVPGESFDPATGNYSHTTPEDTAVSGKVI
ATDKDGDTLTYTLNSQPTHGTVVFKADGSYTYTPSQDYNGKDSFTVLVDDGHGGKVTSTV
NIDITPVNDAPDAINDVTTTAYNTPVVNVNVLGNDKDVDGDTLTVTKAELADTTKGTITL
NADGTINFTPATNVTGPVVVNYTISDGHGGTDTAQLTINVGNDATPPSIANQSFTYAENQ
TTGAIVGSVTASDNTGVTGYGFKWANGSINATSEDGFYSINAAGKISLTAAGVASTMNDF
DDTGAGAKNSSSYTVDVVDAAGNHSSATVTLGVTDLDDTAPVIANQSFTYAENQTAGAIV
GSVTATDNTGVTGYGFKWANGSINATSEDGFYSINAAGKISLTAAGVDSTMNDFDDTGAG
AKNSSSYTVDVVDAAGNHSSATVTLGVTDLDDTAPVIANQSFTYAENQTTGAIVGSVTAT
DNTGVTGYGFKWANGSINATSEDGFYSINAAGKITLTAAGVASTMNDFDDTGAGAKNSSS
YTVDVVDAAGNHSSATVTLGVTDLDDTAPVIANQSFTYAENQTAGAIVGSVTATDNTGVT
GYGFKWANGSINATSEDGFYSINAAGKISLTAAGVASTMNDFDDTGASAKNSSSYTVDVV
DAAGNHSSATVTLGVTDLDDTAPVIANQSFTYAENQTAGAIVGSVTATDNTGVTGYGFKW
ANGSINATSEDGFYSINAAGKISLTAAGVASTMNDFDDTGAGAKNSSSYTVDVVDAAGNH
SSATVTLGVTDLDDTAPVIANQSFTYAENQTTGAVVGSVVASDNVGVVAYGFKWASGSVA
TTSEDGFYKIDSTGKITLTAAGIASTMNDFDDTGASAKNSSNYVIDVMDAARNHSTATVT
LSVTDLDDTAPTIANQTFSYAENQATGAIVGSVVASDNTGVTGYGFKWSNGTINATSQDG
FYSINSAGKISLTAAGVASTMNDFDDTGASAKNSSNYTIDVVDAAGNHSTATVGLNVTDL
GDFNGGGGVDTFMLSKNGGNNAILNISLNTYMLPNGQWADVGAGPGMGVTKQVAVTLQTD
LFVNSSDSNDYVDLGVSYGNNTVYTGSSLPNATTGQPSQTTLLNTDFMQKDVITDADGIG
ITNIMSPVQPITDTVVMGHGNDTVYGGGGNLTAYGADGNDTLRGNSGVDGLRGGAGNDTL
IGGAGNDVLRGDSGSDVFKWTLGDQGSVGTPARDIVMDFNNAKSGNVAGDVDALDLRDLL
QGETHNAAVTGDIGNLLNHLHFEKSGSDTIVHISSKGEFSGSNWVAKEDQVITLQGVDLT
TAGNDQAIIQDLLKNGKLITD
NT seq
9786 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacaatcatcggtagcagcaacagcgccaaagcaatcaccgtcgtggaaggc
gaggcatttatccgcgatgccagcggtaaagtgagcccagttgctgcaggtgatgtgttg
caagaaggccaggtgattttcacctccagtaccggccatgtgaccttgctcttgcctaat
ggccaagtgctggaattgggcgctgatcgcaacttgctactcgatggcgatgttacagcg
agtgcgccgacggatccgaccgaagccttggtggctaatgcaggcagcagtgccgatcaa
atcatcaatgccatcaatgctggcaaagacctttccgaagaattagatgcaactgcagcc
ggtttgaatgcgggcgctggcggtgaagatggtcacggttttgtccgcttattgcgaatt
gccgaagccgtcgatcctgtcagctttgaatttaaaaccgagcttaacccagttcatgac
agcatcgaacccgcagccaatccagctgccgtcgttttgctgcctgaaaaccagcagcct
gttggacaaaatcaatcagcaacgacgccagaagatacgccagttcgcggccaagccatc
gcccaagatagtgatggcgatgtgctcagttacagcaaatcgagcgacccagcgcacggt
acagtgactgtcgatggcaaaggcgcttgggtttacacgccgaacaaagactttaatggt
aatgatagctttacgatcttggtcgatgacggcaagggcggcaaagacaccattaccgtc
aatgtcggcgtgacaccggtgaatgatccgccagtcttggttgatgccaatggccagcca
ttgggcaacgatatggcggtgagtacacccgaagacaccccagttagcggcaagctcgac
gccaaagatcccgatggcgatacactgacattcagcaaaaccagcgacccagcccacggt
agtgtcacggtcgatccaaacggcggctggacttatacgccaaacaaagactacaacggt
ccagattcattcacggttttggtcgatgatggcaaaggcggcaaagacacaattaccgtc
aatgtgggcgtaacgccagtcaacgatccacctgtaccggttgatccaaaagtcccaggc
gagagtttcgacccagccaccggcaactacagccacaccacgccagaagacacggcagtg
agcggcaaagtcatcgccaccgacaaagacggcgacacgctgacgtacacgctcaacagc
cagccaacgcacggcacagtcgtgttcaaagccgacggctcgtacacctacaccccaagc
gctgactacaacggcaaagacagctttaccgttctggttgacgacggccacggcggtaaa
gtgaccagtacggtgaatatcgacgtgacaccggttaacgatccacctgttccagttgat
ccaaaagtaccgggtgaaacgttcgatccagccaccggcaactacagccacaccacgcca
gaagacacggcagtgagcggcaaagtcatcgccaccgacaaagatggcgacacgctgacg
tacacactgaacagccagccaacgcacggcactgtcgtgttcaaagccgacggcagctac
acctacacgccaggccaagactacaacggcaaagacagctttaccgttctggttgacgat
ggccacggcggtaaagtgaccagcacggtcaatatcgacatcacaccagtcaacgacgcc
cccgatgcgatcaacgacaccaccagcactgccatcaataccccggtggtgaatgtgaac
gtactcggcaacgacaaagacgttgacggcgataccctcacagtgaccaaagcagaactc
gctgacaccaccaaaggtacggtcacgctcaacgccgacggcacgatcaacttcacgccc
gcgaccaacgtcaccggcccagtcgtggtgaactacaccatcagcgatggacatggtggt
acagataccgcccaactgacgattaacgtgggcgccaacacgccaccgactggcgcagac
aaaacgctcacgctggcagaagataccaacgtcaccgttaaagccagcgactttggcttt
agcgacgccgacgcaggtcaaacgctgtctgccgtccgcatcgacagcctgccagccaat
ggtcaactgacgctcaacggcgcggcggtgacagccggtcaggaaatcagcgtgcttgac
ctgaacgccggcaaactggtgttcacacctgctgccgacgccaatggtaacaactacgcc
aacttcaccttcagcgtcaaagacagctcaggtgcgtttgacaccgtgccaaacaaagtg
acgttcgatgttacgccagtcaacgacaccccaacaccggtagatccaaaagtccccggt
gaaacgttcgacccagcctccggcaactacagccacaccacgccagaagacacggcagtg
agcggcaaagtgacagccaccgacaaagacggcgacacgctgacgtacacactgaacagc
cagccagcacacggcaccgtcgtattcaaggctgacggcagctacacctacacgccaagt
caagactacaacggcaaagacagcttcacggttctggttgacgacggccacggcggtaaa
gtgaccagcacggtcaatatcgacgtgacaccagtcaacgatccacctgtaccggttgat
ccaaaagtacctggtgagagtttcgacccagccaccggcaactacagccacaccacgcca
gaagacacggcagtgagcggcaaagtcatcgccaccgacaaagacggcgacacgctgacg
tacacgctcaacagccagccaacgcacggcacagtcgtgttcaaagccgacggctcgtac
acctacaccccaagcgctgactacaacggcaaagacagctttaccgttctggttgacgac
ggccacggcggtaaagtgaccagtacggtgaatatcgacgtgacaccggttaacgatcca
cctgttccagttgatccaaaagtaccgggtgaaacgttcgatccagccaccggcaactac
agccacaccacgccagaagacacggcagtgagcggcaaagtcatcgccaccgacaaagat
ggcgacacgctgacgtacacactgaacagccagccaacgcacggcactgtcgtgttcaaa
gccgacggcagctacacctacacgccaggccaagactacaacggcaaagacagctttacc
gttctggttgacgatggccacggcggtaaagtgaccagcacggtcaatatcgacatcaca
ccagtcaacgacgcccccgatgcgatcaacgacaccaccagcactgccatcaataccccg
gtggtgaatgtgaacgtactcggcaacgacaaagacgttgacggcgataccctcacagtg
accaaagcagaactcgctgacaccaccaaaggtacggtcacgctcaacgccgacggcacg
atcaacttcacgcccgcgaccaacgtcaccggcccagtcgtggtgaactacaccatcagc
gatggacatggtggtacagataccgcccaactgacgattaacgtgggcgccaacacgcca
ccgactggcgcagacaaaacgctcacgctggcagaagataccaacgtcaccgttaaagcc
agcgactttggctttagcgacgccgacgcaggtcaaacgctgtctgccgtccgcatcgac
agcctgccagccaatggtcaactgacgctcaacggcgcggcggtgacagccggtcaggaa
atcagcgtgcttgacctgaacgccggcaaactggtgttcacacctgctgccgacgccaat
ggtaacaactacgccaacttcaccttcagcgtcaaagacagctcaggtgcgtttgacacc
gtgccaaacaaagtgacgttcgatgttacgccagtcaacgacaccccaacaccggtagat
ccaaaagtccccggtgaaacgttcgacccagcctccggcaactacagccacaccacgcca
gaagacacggcagtgagcggcaaagtgacagccaccgacaaagacggcgacacgctgacg
tacacactgaacagccagccagcacacggcaccgtcgtattcaaggctgacggcagctac
acctacacgccaagtcaagactacaacggcaaagacagcttcacggttctggttgacgac
ggccacggcggtaaagtgaccagcacggtcaatatcgacgtgacaccagtcaacgatcca
cctgtaccggttgatccaaaagtacctggtgagagtttcgacccagccaccggcaactac
agccacaccacgccagaagacacggcagtgagcggcaaagtcatcgccaccgacaaagac
ggcgacacgctgacgtacacgctcaacagccagccaacgcacggcacagtcgtgttcaaa
gccgacggctcgtacacctacaccccaagcgctgactacaacggcaaagacagctttacc
gttctggttgacgacggccacggcggtaaagtgaccagtacggtgaatatcgacgtgaca
ccggttaacgatccacctgttccagttgatccaaaagtaccgggtgaaacgttcgatcca
gccaccggcaactacagccacaccacgccagaagacacggcagtgagcggcaaagtcatc
gccaccgacaaagatggcgacacgctgacgtacacactgaacagccagccaacgcacggc
actgtcgtgttcaaagccgacggcagctacacctacacgccaggccaagactacaacggc
aaagacagctttaccgttctggttgacgatggccacggcggtaaagtgaccagcacggtc
aatatcgacatcacaccagtcaacgacgcccccgatgcgatcaacgacaccaccagcact
gccatcaataccccggtggtgaatgtgaacgtactcggcaacgacaaagacgttgacggc
gataccctcacagtgaccaaagcagaactcgctgacaccaccaaaggtacggtcacgctc
aacgccgacggcacgatcaacttcacgcccgcgaccaacgtcaccggcccagtcgtggtg
aactacaccatcagcgatggacatggtggtacagataccgcccaactgacgattaacgtg
ggcgccaacacgccaccgactggcgcagacaaaacgctcacgctggcagaagataccaac
gtcaccgttaaagccagcgactttggctttagcgacgccgacgcaggtcaaacgctgtct
gccgtccgcatcgacagcctgccagccaatggtcaactgacgctcaacggcgcggcggtg
acagccggtcaggaaatcagcgtgcttgacctgaacgccggcaaactggtgttcacacct
gctgccgacgccaatggtaacaactacgccaacttcaccttcagcgtcaaagacagctca
ggtgcgtttgacaccgtgccaaacaaagtgacgttcgatgttacgccagtcaacgacacc
ccaacaccggtagatccaaaagtccccggtgaaacgttcgacccagcctccggcaactac
agccacaccacgccagaagacacggcagtgagcggcaaagtgacagccaccgacaaagac
ggcgacacgctgacgtacacactgaacagccagccagcacacggcaccgtcgtattcaag
gctgacggcagctacacctacacgccaagtcaagactacaacggcaaagacagcttcacg
gttctggttgacgacggccacggcggtaaagtgaccagcacggtcaatatcgacgtgaca
ccagtcaacgatccacctgtaccggttgatccaaaagtacctggtgagagtttcgaccca
gccaccggcaactacagccacaccacgccagaagacacggcagtgagcggcaaagtcatc
gccaccgacaaagacggcgacacgctgacgtacacgctcaacagccagccaacgcacggc
acagtcgtgttcaaagccgacggctcgtacacctacacgccaagccaagactacaacggc
aaagacagcttcacggttctggttgacgacggccacggcggcaaagtgaccagcacggtc
aacatcgacatcacaccagtcaacgacgctccggatgcgatcaatgatgtgacgacgacg
gcttacaatacccccgtggtgaatgtgaatgtactcggcaacgacaaagacgttgacggc
gataccctcacggtaactaaagctgaactggccgatacgactaagggcacgatcacgctc
aacgccgacggcacgatcaattttacgcccgcgaccaacgtcactggcccagtcgtggtg
aactacaccatcagcgatggtcatggtggcaccgataccgcgcaattaacgatcaacgtg
ggtaacgacgcaacgccgccgagcattgccaaccaatccttcacctacgctgaaaaccaa
acgacgggcgcaatcgttggcagcgtgaccgccagcgacaacactggcgtaacgggttac
ggcttcaagtgggcgaatggcagcattaacgccaccagcgaagatggcttctacagcatc
aacgccgctggcaaaatcagcctcaccgccgccggtgtggccagcacgatgaacgacttt
gatgacaccggcgctggcgctaaaaacagcagcagctacaccgttgatgtggtcgatgca
gccggtaaccacagctcagcaactgtgacgctgggcgtaacggatctggatgacactgca
ccagtgattgccaaccaatccttcacctacgctgaaaaccaaaccgcaggcgcaatcgtt
ggcagcgtgaccgcgaccgataataccggcgtaacaggttacggcttcaagtgggcgaat
ggcagcattaacgccacgagcgaagatggcttctacagcatcaacgccgccggcaagatc
agcctcaccgctgcgggcgttgacagcacgatgaacgactttgacgacactggtgcgggc
gctaaaaacagcagcagctacaccgttgatgtggtcgatgccgcaggtaaccacagcagt
gcaactgtgacgctgggcgtcacggatctggacgacactgcacctgtcattgcgaaccag
agcttcacctacgctgaaaaccaaaccaccggcgcaatcgtcggcagtgtgaccgcgacc
gacaacaccggcgtaacaggttacggcttcaagtgggcgaatggcagcatcaatgcgacc
agtgaagatggcttctacagcatcaacgccgccggcaaaattacgctgaccgctgcgggc
gtggccagcacgatgaacgactttgatgacactggcgctggcgctaaaaacagcagcagc
tacaccgtcgatgtggtcgatgctgctggcaaccacagctcagcaaccgtcacgttgggc
gtaacggatctggacgacactgcacctgtcattgcgaaccagagctttacctacgctgaa
aaccaaaccgcaggcgcgatcgttggcagcgtgaccgcgaccgacaacactggcgtaaca
ggttacggcttcaagtgggcgaatggcagcatcaacgcgacgagtgaagatggcttctac
agcatcaacgccgccggcaagatcagcctcaccgctgcgggcgtggccagcacgatgaac
gactttgacgacaccggcgcttcggcgaaaaacagcagcagctacaccgttgatgtggtc
gatgctgcgggtaaccacagctcagccactgtgacgctgggcgtaacggatctggacgac
actgcacctgtcattgcgaaccagagcttcacctacgctgaaaaccaaaccgcaggcgcg
atcgttggcagcgtgaccgcgaccgataacactggcgtaacaggttacggcttcaagtgg
gcgaatggcagcatcaacgccacgagcgaagatggcttctacagcatcaacgccgccggc
aaaattagcctcaccgctgcgggcgttgccagcacgatgaacgactttgacgacaccggc
gcgggcgctaaaaacagcagcagctacaccgttgatgtggtcgatgccgcaggtaaccac
agcagtgcaaccgtcacgcttggcgtcacggatctggacgacactgccccagttatcgcc
aaccaatcgtttacgtacgctgaaaaccaaacgactggtgccgttgttggctctgtcgtg
gcgagtgacaatgtcggcgtggtggcttatggctttaagtgggccagcggttcggtggcg
acgaccagtgaagatggtttctacaaaattgattcgacaggcaagatcacgctgactgcg
gcaggtattgccagcacgatgaatgatttcgatgacacaggggcttcggcgaaaaatagc
agcaattatgtgattgatgtaatggatgccgcacgcaatcacagtaccgctacggtgacg
ctgagtgtgacggatttggatgatacggcgccgacgattgcgaatcaaacgtttagctat
gccgaaaatcaagcgacaggcgcgattgtgggtagcgtagtggccagcgacaacaccggc
gtaacgggctatggctttaagtggagcaatggcacgatcaatgccacgagccaagatggt
ttctacagcatcaattcagccggcaagatcagcctgactgcggcgggcgttgccagcacg
atgaacgattttgacgacacgggcgcttcggcgaaaaacagcagcaattacacgatcgat
gtggtcgatgctgccggtaatcacagtacggcgacggttggtctcaatgtaaccgatctg
ggcgactttaacggtggtggtggtgtagataccttcatgctgtcgaagaatggcggaaat
aatgcgattctgaatatcagcttgaatacgtatatgttgccgaatggtcagtgggctgat
gtgggggctggcccgggtatgggcgtgaccaaacaggttgcggtgactttacagacggat
ttgtttgtgaattccagcgatagcaatgactatgttgaccttggggttagctatggcaat
aacaccgtctacacaggctcatccttacccaatgctacgacaggacagccatcgcaaacg
acattactgaataccgacttcatgcaaaaagacgtgatcactgatgccgatggcattggt
atcaccaatatcatgagcccagttcagccgattactgatacggtggtaatgggtcatggc
aatgacactgtgtatggtggtggcggtaatctgacggcttatggcgcagatggcaatgac
accttgcgtggcaattccggtgtcgatggcttacgtggtggtgcgggtaatgacaccttg
atcggtggcgcaggcaatgatgtcttgcgtggtgactctggctcggatgtctttaagtgg
actttgggtgatcagggtagcgtcggtacgccagcgcgcgacattgtgatggatttcaat
aatgctaaatcaggtaatgtggcgggtgatgtcgatgcacttgatttgcgtgatctattg
caaggtgaaacgcacaatgccgccgtgactggcgatattggtaatttgctaaatcacctg
cattttgaaaaatcaggcagcgataccattgttcatatcagcagcaaaggtgagttcagt
ggtagtaactgggtggcaaaagaagatcaggtcatcactttgcagggcgtggatttgacc
acggcgggtaatgatcaggccatcattcaagatctgctcaaaaatggtaagctcattact
gattaa
DBGET
integrated database retrieval system
