Chitinibacter bivalviorum: HQ393_16060
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Entry
HQ393_16060 CDS
T06696
Name
(GenBank) retention module-containing protein
Organism
chiz
Chitinibacter bivalviorum
Pathway
chiz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chiz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HQ393_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
HemolysinCabind
VWA
VWA_2
CshA_repeat
CobT_C
Motif
Other DBs
NCBI-ProteinID:
QLG89639
UniProt:
A0A7H9BME5
LinkDB
All DBs
Position
complement(3397094..3403411)
Genome browser
AA seq
2105 aa
AA seq
DB search
MASKTTQTASNSAKSANHTGVVTQVMGEVKVLTLAGEIKTLQVGDKVNVGDTIQTGSDGA
VSISLDGGGTISVGRSDSMPLTNEMFAALVAPADNAAADAAKIQELIAQGADPTQVAAAS
AAGAGGGEDGGHSFVVLDSPESRVAVDTGFATTPVIQSVSLIPPDASNAITPTNTPPVAN
NDTFTPASPPNALNDALNTNEDTPLVIQGTTLLANDSDADGNPLTIIGVGTAGNGTVILN
ADGSITYTPNANYNGPDSFTYTISDGQGGTSTATVTVGVTPVNDPPVLLNPENLAPLGDD
VSVTTPEDTPVGGKLAATDVDGDTLTFSLTGNQPAHGTVTVNADGTWLYTPNTNYNGPDS
FTALVDDGKGGTDTLVVNIGVTPVNDPPVLVNPENLAPLGDDVSVTTPEDTPIGGKLAAT
DADGDTLTFSLTGNQPAHGTVTVNADGTWLYTPNTNYNGPDSFTAMVDDGKGGTDTLVVN
IGVTPVNDPPVIVDPENLAPLGDDVSVTTPEDTPIGGKLAATDADGDSLTFSLTGNQPAH
GTVTVNADGTWLYTPNTNYNGPDSFTAMVDDGKGGTDTLVVNIGVTPLNAPPTITTDNGN
EGEGNDTVYESGLATGTNAGVSTITASGTFTVADADGLGDIHSVTVAGTTFVIGAGGLAD
LAALVGQTANTSHGSVLIDSYNNGVFGYTYTLTSPVTSGSAESDSFNVSVADGSGASAPV
TVTINIVDDAPVSTSEHVSVTEDAASNVVSGNVLDNDVSGADSPKSFAGWSTGDAATITA
LQNFGTLVQDSDGHWSYTLNNGLSATQALTGSDQTDYVLHYTVQDADGTTSPATLTITIK
GANDGPTITTDNGNDGEGNDTVYESGLATGTNAGVSTITASGTFTVADADGLGDIHSVTV
AGTTFVIGTGTGEFVDLAALVGQTANTSHGSVLIDSYNNGVYSYTYTLSGAVPDIANQVE
TDSFTVSVSDGVAPAASATITIEINDDIPIAKADSNNISANDFNSEFEGVQELPAVQTSG
NVLLGDLNGGVADVQGADQPAKVTQVIFGTNVQAVTTDAPTSIDGKYGTLLLNSDGSYTY
TLNNSSNAVQELGNNEHPTDVFSYSIKDADGDVSNLTSLTITVNGADDAIVLDTKLSGEV
SSGTVYEAGLSTGSKADGDATTDPTTFTSSFTIKSIDGLDHVTIGTGANTARVNFTQAPD
GSWSASVADSSADSALGNSLTVTNAVYSSTSHTWTFSYSYTLNAPETHSAPGNDNVSDTL
SVMALETDGSTANGTLSITVVDDVPTAKADFDSVTEDASSTIATGNVITGVDLAGSHDSN
SSDGVADVQGADRNVMVTHIGFGTNVQEVHTGTPTSINGQYGSLSLNSDGSYTYSLHNSS
NAVQELGNNEHPTEVFTYTITDADGDRSSQTLTISVNGADDAIALDNKLITETNSGTVNE
AGLPSGSLADSDPTTQPTSLAGSFTVKSIDGLDHVTIGTGAGNTATVSFTQAADGSWTPH
FTDPSAVSALGNSLSITGSSYNAADHTWTLNYTYTLQAAETHSAAGNDTLIDTLAVSAIE
TDGSTANGTIRIGVVDDAPIAKDISLSSATHVVETNLVLTIDVSGSMQGSKLDLAKQALS
NVIDQYDALGDVRIMLVNFSSDASLQGSNTWLSIGAAKALINLLSAGGNTNFDAALAQIT
THYNDYGKLTGEGVQNVSYFLSDGVPTVGGGITGSEIGAWTHFVDINDIKSLAFGIGTGA
TLSTLEPIAYDGVTNTDPSSGVTLVTNASNLPSALVNSAQPVLNFSLLDNGGSFGADGGH
VNNIIIDGHTYSFGDASKTMTQTGNIYSYDATTHELTVNTQTGSTLNGGTFTVDMDTGVA
HFTGPASLTTALTENISFQLIDNDGDVSASKNLGVTIAAADSGSNVYDTTGGHTLTGTAF
NDTIDGNDGNDTINGNAGHDRLDGGTGNDTLNGGDGNDVLYGGIGDDTINGDSGNDVLIG
GKGNDILNGGSGVDTFVFSSTASDNGKDTIQDFTVAPKVAGLVQGDILDISDLLTPSTAA
TFNSSEAAAGAFLQFVQDGANTKVMFDADGSGTSAAPVQVATLTGVNATDLLHHLLDNGE
IKTSH
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaaaacaacccaaaccgccagcaattcagcgaaatccgccaaccatactggc
gttgtcacccaagtaatgggtgaagttaaagtcctaacactggcgggtgaaatcaaaacc
ttacaagttggcgacaaagtcaacgtgggcgatacgatacaaactggctcagatggcgcg
gtgtcgattagcctcgatggtggcggcacaattagcgtaggccgttcggatagcatgccg
ctaactaatgaaatgttcgcagctttagtcgcccctgcagataatgcggccgccgatgcc
gcaaaaatccaagaattaatcgctcaaggcgctgatccaacccaagtagcagccgcctca
gcggctggcgctggcggcggtgaagatggcgggcatagctttgtggtgctcgattctcct
gaatcaagggttgctgttgataccggttttgcaactacaccagtgatccaaagcgtgagc
ttgatcccccctgatgcgagcaacgccatcacgccaacaaatacaccgcccgtagccaac
aatgacacctttactccagccagcccaccgaatgctttgaatgatgcactgaacaccaac
gaagatacgccactggtgattcaaggtacgacactgcttgccaatgacagcgatgcagat
ggcaacccactcaccattattggtgtcggcacagcaggcaacggtacagtgatactcaac
gccgatggctcgatcacctatacacccaacgccaattacaacggccccgatagtttcacc
tacaccattagcgatggacaaggcggcacatcaaccgccaccgttactgtcggcgttacc
cctgttaatgatccacccgtactgcttaaccctgaaaacctcgccccattgggcgatgac
gtcagtgtcactacacccgaagacacgccagtcggcggtaaactggctgccactgacgtg
gatggcgatacgctgacctttagcctgacaggcaatcaacccgcccacggcaccgtcacc
gtgaatgccgatggcacttggctctacacccccaataccaactacaacggcccagatagc
tttacggctttggtcgatgatggcaaaggcggcactgatactttagtcgtcaatattggc
gtcacaccagtcaacgatccacccgtactggttaaccctgaaaacctcgccccattgggc
gatgatgtcagcgtcactacgcccgaagacacgcctatcggtggcaaactggccgccact
gatgcggatggcgatacgctgacctttagcctgacaggcaatcaacccgcccacggtacg
gtcaccgtgaatgccgatggcacttggctctacacccccaataccaactacaacggccca
gatagctttacggctatggtcgatgatggcaaaggcggcaccgatactttagtcgtcaat
attggcgtcaccccagttaacgatccacctgttattgttgaccctgaaaacctcgcccca
ttgggcgatgatgtcagcgtcactacgcccgaagacacgcctatcggcggcaaactggcc
gccactgatgcggatggcgatagcctgacctttagccttaccggcaatcaacccgcccac
ggtacggtcacagtgaatgccgatggcacttggctctacacccccaataccaactacaac
ggcccagatagctttacggctatggtcgatgatggcaaaggcggtactgatactttagtc
gtcaatattggcgtgaccccactcaacgccccccccaccatcaccaccgataatggtaat
gaaggcgaaggcaatgacaccgtttatgagtctggtctggcgaccggtacgaatgcgggg
gtgagcaccatcaccgccagcggtacctttaccgtcgccgatgccgatggcttgggcgat
atccattccgtcaccgtggcgggcacgacctttgtgattggtgcgggtggtttggctgat
ctggccgccctcgtgggtcaaaccgccaatacctcccatgggtctgtgctgatcgacagc
tataacaatggcgtctttggctatacctacactttaaccagccccgtcacctcaggcagt
gccgagagcgatagctttaatgtcagtgtggccgatggcagcggcgcttcagcgccagtg
accgtcaccatcaatatcgtggatgatgcccccgtatcgacttccgaacacgtgagtgtg
acggaagatgcggccagcaatgtagtgtcagggaatgtgctcgacaacgatgtgtctggc
gcggattcacctaaatcctttgcgggttggagtacaggcgatgccgcaacgatcacggcg
ctgcaaaacttcggcaccttggtacaagatagcgatgggcattggagctatacgctcaac
aatgggctcagtgcaacgcaagcactgacgggcagtgatcagaccgattatgtcttgcac
tacaccgttcaagatgccgatggaacgaccagccccgcgacattgaccattacgatcaaa
ggcgcaaatgatggccctaccatcaccactgataatggcaatgacggcgaaggcaatgac
accgtttatgagtctggtctggcgaccggtacgaatgcgggggtgagcaccatcaccgcc
agcggtacctttaccgtcgccgatgccgatggcttgggcgatatccattccgtcaccgtg
gcgggcacgacctttgtgattggcaccggtacgggcgagtttgttgatctggccgccctc
gtgggtcaaaccgccaatacctcccatgggtctgtgctgatcgacagctataacaatggt
gtttatagctatacctacacactttctggcgcagtacctgatattgccaatcaagttgaa
acggactcctttactgtcagtgtttcggatggagtagctcctgcagctagtgccaccatc
actatcgagatcaatgacgatatccccatcgccaaagccgatagcaacaacattagcgcc
aatgatttcaactctgagtttgaaggagtacaagaattaccagcggtgcaaaccagcggc
aatgtcttactgggtgatctgaatggcggcgtggccgatgtacaaggtgcagaccaaccc
gccaaagtcactcaagtgatcttcggtaccaatgtacaagccgtgacgacagatgcacca
accagcatcgatggtaaatacggcaccttgctactcaacagcgatggcagctacacctat
acactcaataacagcagcaatgcggtacaagagctgggcaataacgagcatcctaccgat
gtatttagctacagcattaaagatgccgatggcgatgtttccaacttaacctccctcacc
attacagtgaacggcgctgatgatgccattgtgctcgacacgaaactcagcggcgaagtc
agctcaggtaccgtgtatgaagcaggcttgtcgacgggctcgaaagcagatggcgatgca
acgaccgacccaaccaccttcaccagctcgttcaccatcaaatcgatcgatgggctcgat
catgtgacgatcggcactggggccaatactgcgcgtgtcaatttcactcaagcccctgat
ggatcatggagcgcgagcgtcgccgactcgtccgctgacagcgctttgggcaatagcctg
accgtgacaaatgcagtgtatagctctacaagccacacgtggaccttcagctacagctat
accctgaatgcaccagaaacccacagcgcaccaggcaatgacaacgtgagcgatacctta
agtgtgatggccttagaaaccgatggcagcaccgccaatggtacgctcagcattactgtg
gtggatgatgtgccaacggctaaagccgattttgatagtgtgacagaagatgccagctca
acgatcgccactggcaatgtgattacgggtgttgacctcgcgggctcccacgatagcaac
agcagcgatggtgttgccgacgtgcaaggcgccgatcgcaatgtgatggtcacccacatt
ggctttggcaccaatgtgcaagaggtacatacaggtacaccaaccagcatcaatggccaa
tatggcagtctgtcactcaatagcgatggcagctacacctatagcctgcataacagcagc
aatgcggtacaagaactgggcaacaacgagcatcctaccgaggtgtttacctacaccatc
accgatgcagatggtgatcggtctagccaaacgctcaccatttcggtgaacggggcggat
gatgccattgccctcgacaataaactcatcacagaaaccaactcgggaacggtgaatgaa
gcaggtttaccttcaggctcattggcggatagcgatccaaccactcagcctacatcgctg
gcgggctcatttacagttaaatcgatcgatggtcttgaccatgtcaccattggaacgggg
gctggtaacacagcgacggtcagctttacccaggcggcagacggatcatggacaccgcac
tttactgatccatccgcagtcagcgcgcttggtaatagcttaagcatcacgggaagtagc
tataacgccgcagatcatacttggaccttgaattacacttataccttgcaagcggcggaa
acccacagtgccgcaggcaatgatacgttaattgataccttggccgtttctgcgattgag
accgatgggagtaccgccaatggcacaatccgaatcggcgtcgtcgatgatgcgccgatt
gccaaagacattagcctgtctagtgctactcatgtagtggaaaccaatctcgtacttacc
atcgatgtgtccggcagcatgcaaggcagcaaattggatcttgcgaaacaggcacttagc
aatgtaattgatcagtacgacgcattaggtgatgtccgaataatgttggtcaacttctcc
agtgatgcctcactacaaggctcgaacacttggctttcaattggcgcggcaaaagcactt
attaatcttttaagtgctggtggcaacaccaattttgacgcggccttagctcaaattacc
acgcactataatgactatggcaaattaacaggggaaggggtacaaaacgtcagctacttc
ctatctgatggcgttcctactgttggaggaggaatcacaggtagtgaaattggcgcttgg
acacattttgtcgacatcaatgatattaaatccttagcgtttggcattggtaccggagcc
actctgagtacgctagagcccattgcatacgatggcgtgaccaatactgatccaagcagt
ggcgttacgctggtaaccaatgccagcaacctacctagcgcattggtcaatagtgcccaa
cccgttttgaattttagcctgctcgataatggtggtagctttggcgcagacggtggccat
gtgaataacattattatcgacggccatacctacagctttggtgatgcaagcaaaaccatg
actcagacagggaatatttattcctatgatgccactactcatgagctcaccgtaaacaca
cagactggtagcacgctcaatgggggaacattcacagtagatatggacactggcgttgct
cacttcacggggccagcctctttaactacagcattaacagaaaatatatcgttccaattg
atcgataatgatggagatgtcagtgccagtaaaaatctcggcgtgacaattgctgcagca
gacagcggcagtaatgtttatgacaccacaggtggacacaccctcacaggtacagcgttt
aatgacaccattgatggcaatgacggcaacgacaccatcaatggcaatgctggccacgat
aggttagatggtggaaccggcaacgacacactgaacggcggagatgggaacgatgttctg
tatggcggaattggagatgacacaatcaatggcgatagtggcaatgacgtattaattgga
ggcaaaggtaatgacattctgaatggtggcagcggtgttgatacatttgtatttagcagc
acggcaagcgacaatggcaaagacaccattcaagacttcaccgttgcgcccaaagttgca
ggccttgtgcaaggggatatccttgacatcagcgacttactaactccaagcactgctgcg
acattcaactccagtgaagctgcagcgggtgcattcttgcaattcgtgcaggatggcgcc
aataccaaagtcatgtttgatgcggatggctctggtacaagcgcggccccagttcaagtg
gcgacactgacaggggttaatgcaacggatctgctgcatcacttgctggataatggtgaa
atcaaaaccagtcactag
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