Cardiobacterium hominis: NCTC10426_00036
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Entry
NCTC10426_00036 CDS
T05791
Symbol
ntrC_1
Name
(GenBank) Nitrogen assimilation regulatory protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
chj
Cardiobacterium hominis
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chj03000
]
NCTC10426_00036 (ntrC_1)
Transcription factors [BR:
chj03000
]
Prokaryotic type
Other transcription factors
Others
NCTC10426_00036 (ntrC_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA
AAA_22
AAA_16
AAA_2
NACHT
ATPase_2
AAA_19
NTPase_1
AAA_30
AAA_18
MCM
AAA_14
AAA_7
ABC_tran
NPHP3_N
ResIII
AAA_29
TsaE
T2SSE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
VEG76033
LinkDB
All DBs
Position
1:55993..57594
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AA seq
533 aa
AA seq
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MTKKTRVVISFLGTQLDSGNGEGRWHKWRPNVAMNQRSDLTLDRIELFYADKYRPLADQV
RTDIRDRAPHTAVNLVQMELANPWDFSEVYTRLHDWAASYPFDTEKEEYWVHITTGTHVA
QICLFLLVESRQIPGVLLQTAPPKNQKRQMARGDVGTYEVIDLDLARYDPLAARLAAVRD
DAVRYLKSGIATRNVAFNRMIAEIEQVALNSPSPILLTGPTGAGKSMLARRIYELKKARH
QVRGIFVDVNCATLRGDGAASALFGHKKGAFTGAVEKRDGYLKSADGGVLFLDEIGELGL
DEQAMLLKALEEKRFYPVGSDQESESHFQLIAGTNRDLRADVREGRFREDLYARINIWNY
PLPALAERREDIEPNISHQLALASQELGRTTRFNKEAQAAYLAYALSPQASWRGNFRDLA
ASIMRLATLAPQGRITRELVDAEIARLQYLWQDERPTTTALPAAINADELDLFERLQLEA
VINICRQHKSLAAAGRTLYNASREQLAKPNDSDRLRKYLQKYGLTWADVQDDA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaaacccgcgtcgttatcagcttcctcggcacccaactcgactccggcaac
ggtgaaggccgctggcacaaatggcggccgaacgtcgccatgaaccagcgcagcgacctc
accctcgaccgcatcgaactgttttacgccgacaaataccggccgctcgccgaccaagta
cgcaccgacatccgcgaccgcgcgccgcataccgccgtcaatctcgtgcagatggaactc
gccaacccctgggatttcagcgaagtctatacccgcctgcacgactgggcggcaagctat
ccctttgacaccgaaaaagaagaatactgggtacacatcaccaccggcacgcacgtcgcg
caaatctgcctctttctcctcgtcgaatcgcggcaaatccccggcgtcctgctgcaaacc
gcgccgccgaaaaaccaaaaacggcaaatggcgcgcggcgacgtcggcacttacgaagtc
atcgaccttgaccttgcccgctacgacccactcgccgcccgcctcgctgcggtgcgcgac
gacgccgtgcgctacctgaaaagcggcatcgccacgcgcaacgtggcgtttaaccgcatg
attgccgaaatcgagcaagtcgcgctcaactcgccctcccctatcctgctcaccggcccg
accggcgcgggcaaatccatgttggcgcggcggatttacgagctaaaaaaagcgcggcac
caggtgcgcggcatctttgtcgatgtgaactgtgccaccctgcgcggcgacggtgcggcg
tctgccctctttggccacaaaaaaggcgcgtttaccggcgcggtggaaaagcgcgatggc
tacctgaaaagcgccgatggcggcgtgcttttccttgacgaaatcggcgaactggggctg
gacgaacaggcgatgctgttgaaagcgctggaagaaaaacgcttctaccccgtcggcagc
gaccaggaaagcgaaagccacttccagctgattgccggtaccaaccgcgacctgcgcgcg
gacgtgcgcgaagggcgtttccgcgaagacctctacgcgcgcatcaacatctggaactac
ccgctgccggcactcgctgagcggcgcgaagacatcgagccgaacatcagccaccaactt
gccctcgcctcgcaggaacttggccgcaccacccgcttcaacaaagaagcgcaagccgcc
tacctcgcttatgccctctcgccgcaggcaagctggcgcggcaacttccgcgacttggcg
gcgagcatcatgcgccttgccacgttggcgccgcagggacgcattacccgcgaactggtg
gacgccgaaatcgcccgcctgcaatacctgtggcaggacgagcgccccaccacgaccgcc
ctgcccgccgccatcaacgccgacgaacttgacctgttcgagcgcctgcaactggaagcg
gtgattaacatctgccgtcagcacaaaagcctcgccgccgcggggcgcacgctctataac
gcctcgcgcgaacagctcgccaaacccaacgacagcgaccgcctgcgcaaatacttgcaa
aaatacggcctcacctgggcggatgtgcaggacgacgcataa
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