Cardiobacterium hominis: NCTC10426_00074
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Entry
NCTC10426_00074 CDS
T05791
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chj
Cardiobacterium hominis
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chj03016
]
NCTC10426_00074 (truB)
Enzymes [BR:
chj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC10426_00074 (truB)
Transfer RNA biogenesis [BR:
chj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC10426_00074 (truB)
Prokaryotic type
NCTC10426_00074 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
VEG76068
LinkDB
All DBs
Position
1:complement(99056..99952)
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AA seq
298 aa
AA seq
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MGKRKKIDGVLLLDKPAGISSNQALQQARWLYQAEKAGHGGTLDPFATGLLPVLFGEASK
FGRYFLDGDKAYEATLAFGTETDTGDLSGAVIREAAPPPLDAVDWVALCAGFSGVQRQVP
PVYSALKVGGERAYALARRGELPQLEAREVVIHELRFLGMDGDGARFFVRCSKGTYIRSL
LRDMAAALGSAGHTHALRRVAVAGLTAMTPLATLRAWQEAGDMTALQALLLPLDCCVAHL
PRVVVPPEKLRFIRNGNDIACAAPHGEVALYDGARFFGVGEARDGRVFPQRLCALPPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgcaaaaaaatcgacggcgtactactgctcgacaaacccgccggtatcagc
agcaaccaggcgttgcagcaggcgcgctggctgtatcaggcggagaaggcggggcatggc
ggcacgcttgacccctttgccaccgggctgttgccggtgctgttcggcgaggcgagcaag
ttcggccgctattttctggacggcgacaaggcctatgaggcgacgctcgccttcggcacg
gaaacggatactggcgacctcagcggcgcggttatccgcgaagccgcgccgccgccgctg
gatgcggtggactgggtagcgctgtgcgcaggtttcagcggcgtgcagcggcaggtgccg
ccggtctattccgcgctgaaagtcggcggcgaacgcgcttatgcgctggcgcggcgcggc
gaattgccgcagctggaagcgcgcgaggtggtcattcacgaattgcgttttctgggcatg
gacggcgacggcgcgcgctttttcgtgcgttgcagcaaggggacgtacatccgcagcctg
ctgcgcgacatggcggcagcactcggcagcgccggacatacgcacgcgctgcggcgggtg
gcggtcgcgggactgacggcgatgacgccgctcgccacactgcgcgcctggcaggaagcg
ggcgacatgacagcgttgcaagcgctactgttgccgctcgattgctgcgtcgcgcatttg
ccgcgggtggtggtgccgccggagaagctgcgctttatccgcaacggcaacgacatcgcc
tgcgccgcgccgcacggcgaggtcgcgctgtacgacggcgcacggttttttggcgtcggc
gaggcgcgcgacgggcgggtgtttccgcagcggctgtgcgcgttgccgccagcatga
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