Cardiobacterium hominis: NCTC10426_00101
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Entry
NCTC10426_00101 CDS
T05791
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
chj
Cardiobacterium hominis
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chj03032
]
NCTC10426_00101 (ihfB)
03036 Chromosome and associated proteins [BR:
chj03036
]
NCTC10426_00101 (ihfB)
03400 DNA repair and recombination proteins [BR:
chj03400
]
NCTC10426_00101 (ihfB)
DNA replication proteins [BR:
chj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC10426_00101 (ihfB)
Chromosome and associated proteins [BR:
chj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NCTC10426_00101 (ihfB)
DNA repair and recombination proteins [BR:
chj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NCTC10426_00101 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
VEG76095
LinkDB
All DBs
Position
1:124117..124407
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AA seq
96 aa
AA seq
DB search
MTKSELIDRLCMRYPQLRSQDVEEAVKLIIEKVCQSLEKGDRVEIRGFGSFSLHYREART
GRNPKTGDSVEVPSKSIPYFRAGKELRERVDQNADA
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccgaactgatagaccgcctgtgcatgcgctacccgcaactgcgcagccag
gacgtagaagaagccgtcaaactcatcattgaaaaagtctgccaaagcctggaaaaaggc
gaccgtgtcgaaatccgcggcttcggcagcttctcgctgcactaccgcgaagcgcgtacc
ggacgcaacccgaaaaccggcgactccgtcgaagtcccgtccaaatccatcccctacttc
cgtgcgggcaaagaactgcgcgaacgcgttgaccaaaacgccgatgcctga
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