KEGG   Cardiobacterium hominis: NCTC10426_00108
Entry
NCTC10426_00108   CDS       T05791                                 
Name
(GenBank) CRISPR type III-A/MTUBE-associated RAMP protein Csm5
  KO
K19140  CRISPR-associated protein Csm5
Organism
chj  Cardiobacterium hominis
Brite
KEGG Orthology (KO) [BR:chj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:chj02048]
    NCTC10426_00108
Prokaryotic defense system [BR:chj02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Subtype III-A factors
    NCTC10426_00108
SSDB
Motif
Pfam: RAMPs IHABP4_N
Other DBs
NCBI-ProteinID: VEG76102
LinkDB
Position
1:130475..132118
AA seq 547 aa
MKPLTRHTLHLTPLSPLHLGTGEDYEPTNYLITDGVLYTFDPARAILNPEQERELHAAAQ
SGDLQHIQRYFRHNPKPYIAAATHASSVSKGIAAEYQKNYGEIVQRESKGKNVHNRFQIE
RTATNPHNHQPYIPGSALKGCLRTALLEERSANHHGENPTSKTANRFEQEHLGNFATDLL
RLVKPADLTATSNIATHICYATNHKKKSIIGKDGRPVEGKGIPGRRETIQHGQYRAFSGS
LTLQNLLLDHRPHIKNPGKTLPGETRPDFARLIRAANRYHLTRFTKESALLAERGLVHPQ
WQRSTEQLLRQLIPQFDAGNILLVRLGKNGGAEAKTLEKYAQIKIMGAKGAKPTYEKHTK
TVWLAAENDKTKRDLLPFGWALIEIDPMYDNPALREWCDKNSAHLKDAAVLRDKLHAAQN
AKAEQAAKNAAEAAAKAAAAAAKQAEEEAEAARVAALPTHERRAHDILARLEEHSKTYSD
RNQDKNLALHRDILATLEQAHSELDSASQKQLAELLPYKKLDSACKGFYSGKKEKDIKAA
LQKLRGG
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgaagccgcttacccgccacaccctgcacctcacccctctctccccgctgcacctcggc
acaggcgaagactacgaacccaccaactacctcatcacagacggtgtgctctacaccttc
gaccccgcccgcgccatcctcaaccccgagcaagagcgggaactgcatgctgccgcccaa
agcggcgatctgcaacacatccagcgctacttccgccacaaccccaaaccctacatcgcc
gctgcgacacacgcgagcagcgtcagcaaaggcatcgccgccgaataccaaaaaaactac
ggcgaaatcgtccagcgcgagagcaaaggcaaaaacgtccataaccgcttccaaatcgaa
cgcaccgcaaccaacccgcacaaccaccagccctacatccccggcagcgccctcaaaggc
tgcctgcgcaccgccctgcttgaagaacgcagcgcaaaccatcacggcgaaaaccccacc
agcaaaaccgccaaccgcttcgaacaagaacacctcggcaacttcgccaccgacctgctg
cgcctggtcaaacccgccgaccttaccgccaccagcaacatcgccacccacatctgctac
gccaccaaccacaagaaaaaaagcattatcggcaaagacggccgcccggtcgaaggcaaa
ggcatccccggccgccgcgaaaccatccagcacggccaataccgcgcctttagcggcagc
ctcaccttgcaaaacctgctccttgaccaccgcccgcacatcaaaaacccgggaaaaaca
ctgcccggcgaaacccgtccggatttcgcccgcctcatccgcgccgccaaccgctaccac
ctgacccgcttcaccaaagaaagcgcgctgcttgccgaacgcggcctcgtccatccccaa
tggcagcgcagcaccgaacaactgctgcgccaactcatcccccaatttgacgccggcaac
atcctcctcgtccgccttggcaaaaacggcggtgccgaagccaaaactctcgaaaaatac
gcccaaatcaaaataatgggcgccaagggcgccaaacccacctacgaaaaacacaccaaa
accgtctggctcgccgccgaaaacgacaaaaccaagcgcgacctgcttcccttcggctgg
gcgctcatcgaaatcgaccccatgtacgacaaccccgcgctgcgcgaatggtgcgacaaa
aacagcgcccacctcaaagacgcagccgtcctgcgcgacaaactgcacgccgcacaaaac
gccaaagccgaacaggcggcaaaaaacgccgcagaagccgccgccaaggccgccgctgcc
gccgccaaacaagcggaagaagaagccgaagccgcgcgcgtcgccgccctgcccacgcac
gaacgccgcgcgcacgacatccttgcccgcctggaagaacacagcaaaacctacagcgac
cgcaaccaagacaaaaacctcgcgctacaccgcgacatcctcgccaccctcgaacaggca
cacagcgagctggacagcgccagccaaaaacaactcgccgaactgctgccgtacaaaaaa
ctggacagcgcctgcaaaggcttctacagcggcaaaaaagaaaaagacatcaaggccgcc
ctgcaaaaactgcgcggcggataa

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