Cardiobacterium hominis: NCTC10426_00144
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Entry
NCTC10426_00144 CDS
T05791
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chj
Cardiobacterium hominis
Pathway
chj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC10426_00144 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chj03400
]
NCTC10426_00144 (recD)
Enzymes [BR:
chj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NCTC10426_00144 (recD)
DNA repair and recombination proteins [BR:
chj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10426_00144 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
SH3_13
SLFN-g3_helicase
PhoH
DEAD
ResIII
PIF1
AAA_16
TraI_hel_assoc_N
NPHP3_N
nSTAND3
Sigma54_activat
HerA_C
AAA
Motif
Other DBs
NCBI-ProteinID:
VEG76133
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All DBs
Position
1:complement(165497..167317)
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AA seq
606 aa
AA seq
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MHHLAHYLARQSGCPEHGSILADLLTALQNAHDNGDTLIQLNDAQRAAADTLAATPLLAD
DDRAAPLTRRGDRLWISRNYQQEARLAAMLRERLHAADTPAEPIPADGLRAEQQNAIRLA
RSRRLALINGGPGTGKTYTIARLIHAEQQADPKIRIALAAPTGKAAKRMEESLAAAGVQD
LPAQTLHRLLGIGTDGQARYHMSRHLPHDLIIIDEASMLSLELAHALIAATATDTRLILL
GDADQLAAVEPGAILHDLSHHPALQNHRITLRESQRFRADSGIGQLAAILNGDDGQHGER
LLEALAPYKKEQLPLFCRESDGLRLQTAGAKTSADSHPFPCVAGEGRGGGVKTSRSDNTV
TATSFDAGQPPVTDKNAGHKNLRSQNSDEKTIHWYPTPDANLYRALIAPYQPYLEKLQDA
AANPQELLNTYDQYRILCAGHHGALGTRRINAALRQLHQRAQGADPSLAYYHGLPLMILE
NDHRQQLYNGDTGICFEDDNGLQLHLPGHEPVPLARLNPATLTDAYALSIHKSQGSEYPH
VALALDEHAERLLSRELLYTGITRSKGRLDIYASADALKNAAATPTRRHTGLAWHLDHPH
KTQTNH
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcaccacctcgcccactacctcgcccggcaaagcggctgccccgaacatggctccatc
cttgccgacctcctgaccgccctgcaaaacgcacacgacaacggcgacaccctcatccag
cttaatgacgcgcagcgcgccgccgccgacaccctcgccgccaccccgctcctcgccgac
gacgaccgcgccgcaccgctcacccgccgtggcgaccgcctctggatcagccgtaactac
caacaagaagcgcgtcttgccgcgatgctccgcgagcgcctgcacgcggccgacaccccc
gccgaacccatccccgcagacggcctgcgcgcagaacaacaaaacgccattcgcctcgcg
cgcagccgtcgcctcgccctcatcaacggcggccccggcaccggcaaaacctacaccatc
gcccgcctcatccatgccgaacaacaggccgaccccaaaatccgcatcgcactcgccgca
cccaccggcaaagcggcaaaacgcatggaagaaagcctcgccgcagcgggcgtccaagac
ctgccagcgcagaccctgcaccgcctgctcggcatcggcacggacggccaggcgcgctac
cacatgagccgccatctgccgcacgacctcatcatcatcgacgaagcctccatgctctcg
ctcgaactggcgcatgcgctcatcgccgcgaccgccaccgatacccgcctcatcctcctc
ggcgacgccgaccaactggcggcagtcgaacccggcgccatcctgcacgacctgagccac
catccggcactgcaaaaccaccgcatcaccctgcgcgaaagccagcgctttcgcgccgac
agtggcatcggccaactcgccgccatcctaaacggcgatgacggacagcacggcgaacgc
ctgctggaggcgctcgcgccgtacaaaaaggaacagctcccgctattctgtagagaaagt
gatggacttcgcttacaaaccgccggtgcaaaaacaagcgccgactcgcaccccttcccc
tgcgtagcgggggagggcaggggagggggtgtgaaaacatcgcgtagcgacaacaccgtt
acagcaacatcctttgacgcaggtcagccacccgtgaccgacaaaaacgccggacacaaa
aacctgcgctcccaaaactccgacgaaaaaaccatccactggtaccccacgccagacgcc
aacctctaccgcgccctcatcgcgccttaccagccctacctcgaaaaactgcaagacgca
gctgccaacccgcaggaactcctcaacacctacgaccaataccgcatcctctgtgccggg
catcacggcgcgctcggcacccgccgcatcaacgccgcgctgcgccaactgcaccagcgc
gcgcaaggcgcggatccgagccttgcctactaccacggcctgccgctgatgattctggaa
aacgaccaccgccaacaactctacaacggcgacaccggcatctgcttcgaagacgacaac
ggcctgcaactgcacctgcccggccacgaacccgtgccgctcgcccgtttgaatcccgca
acgctcaccgacgcctacgccctgagcatccacaaatcgcagggctccgaatacccgcac
gtcgccctcgcgctggacgaacacgccgagcgcctcctaagccgcgaactgctctacacc
ggcatcacccgcagcaaaggccgcctcgacatctacgccagcgccgatgcgctcaaaaat
gccgccgccaccccgacccgccgccacaccggcctcgcctggcatctcgaccacccgcac
aaaacgcaaacaaaccattga
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