Cardiobacterium hominis: NCTC10426_00693
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Entry
NCTC10426_00693 CDS
T05791
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chj
Cardiobacterium hominis
Pathway
chj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC10426_00693 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chj03019
]
NCTC10426_00693 (pnp)
03016 Transfer RNA biogenesis [BR:
chj03016
]
NCTC10426_00693 (pnp)
Enzymes [BR:
chj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC10426_00693 (pnp)
Messenger RNA biogenesis [BR:
chj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC10426_00693 (pnp)
Transfer RNA biogenesis [BR:
chj03016
]
Prokaryotic type
tRNA degradation factors
NCTC10426_00693 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_SLS1_2
S1_RRP5
S1_2
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
VEG76667
LinkDB
All DBs
Position
1:765818..767899
Genome browser
AA seq
693 aa
AA seq
DB search
MKENITFSYGKHQVTLESGEIARQADGAVMVNMEGTVVLVTAVAKKTVAEGQDFFPLTVD
YQEKSYAAGRIPGGYFRREGRPSENETLVSRLIDRPLRPLFPEGFFNEVQVIASVMSVNP
DISPDIPAMIGASAAIALSGVPFNGPIGAARVGYKNGAYLLNPSDKELQTSDLDLVVAGT
EGAVLMVESQANELPEDVMLGAVMYGHEQMQVVINAIRELAAKAGKPAWDWQPAPADEAL
IAKVRELAHDKLVAAYQIADKQERQAAVAAVHEAAQAALVSEDGWNAAAVGNTVHDLEYR
VVRDRILAKEPRIDGRDTVTVRPITIRTGVLPRVHGSALFTRGETQALVVATLGTGRDAQ
IIDALTGEYRDIFMLHYNFPPFSVGETGRVGSPKRREIGHGRLARRGVTAILPPESTFPY
TIRVVSEITESNGSSSMASVCGTSLALMDAGVPVKTPVAGIAMGLVKEGERFTVLSDILG
DEDHLGDMDFKVAGSANGVTALQMDIKIDGITREIMEQALTQAKAGRLHILEIMNQAIAQ
PRAEISEYAPRFTTLRIDVEKIKDVIGKGGATIRSITETTGTTIEIEDDGTIKIAAVDKT
AADDARRIIEEITAEPEIGRIYDAKVVKITDFGAFVAFLPGKEGLVHVSQIAEHRVNNVE
DELSVGQEVKVKLLEIDRQGRVRLSIKEAKNPL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaaaacatcacctttagctacggcaaacaccaagttaccctggaaagcggcgaa
atcgcccgccaggcagatggcgccgtcatggtcaatatggaaggcaccgtcgtactcgtg
acagcggttgccaaaaaaaccgtcgccgaaggacaggacttctttccgctgaccgtcgat
taccaagaaaaatcctacgccgccggacgaatccccggcggttacttccgtcgcgaaggc
cgtcccagcgaaaacgaaacactggtctcgcgcctgattgaccgtccgctgcgcccgctc
ttccccgaaggcttcttcaacgaagtacaagtcattgccagcgtcatgtcggtcaatccc
gacattagtccggacatcccggcgatgatcggcgcctctgccgccattgccctctccggc
gtgccgttcaacggcccgattggcgcggcgcgcgtcggttacaaaaacggcgcttacctg
ctcaacccttccgacaaagagctgcaaacctccgaccttgacctcgttgtcgccggcacc
gaaggtgcggtgctgatggttgagtcgcaggcgaacgaactgccggaagacgtcatgctc
ggcgccgtcatgtacggccacgaacaaatgcaggtggtcatcaacgccatccgcgaactg
gccgccaaagcgggcaaacccgcctgggactggcaacctgcgcctgctgacgaagcgctc
atcgccaaagtacgcgaactggcgcacgacaaactcgtcgcggcctaccaaatcgccgac
aaacaagaacgccaggctgccgttgccgccgttcacgaagccgcgcaagctgccttggtg
agcgaagacggctggaatgccgccgccgtcggcaataccgtacacgacctcgaataccgc
gtcgtacgtgaccgtatccttgccaaagaaccgcgcattgacggccgcgataccgtcacc
gtgcgcccgattaccatccgcaccggtgtcctgccgcgcgtgcatggttccgccctcttt
acccgtggcgaaacccaggcactggtcgttgccaccctcggcaccggccgcgatgcacaa
atcatcgacgcccttaccggcgaataccgcgacatcttcatgttgcattacaacttcccg
ccgttcagcgtcggcgaaaccggccgcgtgggctcgccgaagcgccgcgaaatcgggcat
ggccgtctcgcccgccgtggcgtgaccgccattctgccgccagaaagcaccttcccctat
accatccgcgtcgtctccgaaatcaccgaatccaacggctccagctcgatggcctccgtt
tgcggcaccagtcttgcgctgatggatgccggcgtaccggtcaaaaccccggtggcaggc
attgctatgggcttggtcaaagaaggagagcgcttcaccgtcctctccgacatcctgggc
gacgaagaccacctgggcgacatggacttcaaagtcgccggttccgccaatggcgttacc
gccctgcagatggacatcaaaattgacggcatcacccgtgaaatcatggaacaggcgcta
acccaggctaaagccggacgcctgcatatccttgagatcatgaaccaggccattgcccaa
ccgcgtgccgaaatctccgaatacgcgccgcgtttcactaccctgcgcattgacgttgaa
aaaatcaaagacgttatcggcaaaggtggcgcgaccattcgcagtatcactgaaaccacc
ggtaccaccatcgaaatcgaagacgacggcaccatcaaaatcgccgcggtggacaaaacc
gctgccgacgacgcgcgccgcatcatcgaagaaattaccgccgaaccggaaatcggccgc
atctacgacgccaaagtcgtcaaaatcaccgacttcggcgcctttgttgccttccttccc
ggcaaggaaggactggtacacgtctcgcaaatcgccgagcaccgcgtcaataacgtggaa
gatgagctcagcgttggccaggaagtcaaagtcaaactgctggaaatcgaccgccaaggc
cgcgtcaggctttctatcaaagaggcaaaaaatccgctataa
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