Cardiobacterium hominis: NCTC10426_01188
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Entry
NCTC10426_01188 CDS
T05791
Symbol
apxIB_3
Name
(GenBank) RTX-I toxin determinant B
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
chj
Cardiobacterium hominis
Pathway
chj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC10426_01188 (apxIB_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chj02000
]
NCTC10426_01188 (apxIB_3)
02044 Secretion system [BR:
chj02044
]
NCTC10426_01188 (apxIB_3)
Transporters [BR:
chj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NCTC10426_01188 (apxIB_3)
Secretion system [BR:
chj02044
]
Type I secretion system
Adhesin protein transporter
NCTC10426_01188 (apxIB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
SbcC_Walker_B
AAA_16
AAA_22
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
VEG77144
LinkDB
All DBs
Position
1:1251750..1253924
Genome browser
AA seq
724 aa
AA seq
DB search
MNSLLEHVSLLTRILGSPVAAVTLAASVPRDDAGDFDQKALGEELKHQGFENHLQKRPLR
KIPQLALPAVILLRDGEAAVLKKLAGDEAVIEFAGIGEQRLATAELEAQYLGYAWFIKPK
AAKDVRSELPEYELPKGWFWRVIWRFRRYYYQVIIATFLINFLALVSSLYVMNVYDRVIP
NKSMETLWVLSIGVSLAIFFEFLAKLIRGHLTDIAGKKADLIISAALFRRVMQLRMADKP
ASSGSYANNLRDFESVRDFMTSASLLAFVDMPFFLLFITVMHMVAGQLAVVPLTIIPIVV
IAGILAQFPLARSINESMRESSQRQGLAVEAIEGVETLKVNNAFSWAQRRWDAYTAKTAA
SSIKTRDISNFVTSFSAAIQQLNTVILVVYGTYLIHAENVHDRITMGALIACVILSGRAL
GPVAQIAGLAVRFQQARLALQGVNNITRRPIERHADRQYITLDHPEGKIGFENVTFAYGK
EGKRVLDNLTLNVKAGEKIAILGRIGSGKSTLLKLAAGLYEPQNGMVSLDDVDERQIDPY
FLRSEVALLAQSPRLFLGTLRENLDLARSDGFYSDEILLNALKRFGLERLIQGHPHGLDM
QLGENGAGLSGGQQQIVSLARLTLRNPRVVLLDEPTSGLDQNTEQQVLRALADWVRDRTM
IVVTHRPQILMLVDRIIVMEQGQIVMDGPKQAVLDRLSGRPATPPGAPAAQPAPVAGHGK
QETI
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcttgcttgaacacgtcagtctgctgacccgcatactcggcagccccgttgcc
gccgtcaccttggcggcatctgtgccgcgtgacgatgcgggcgattttgaccaaaaagcc
ctcggtgaagaactgaaacatcagggttttgaaaaccacctgcaaaagcgtccactacgc
aaaatcccgcaactggcgctgcccgcagttatcctcttgcgcgacggcgaagcagcggta
ctgaaaaaactcgctggcgacgaagccgtgattgaatttgcaggcattggcgaacagcgc
ctcgccacggcagagcttgaagcgcaatacctcggctatgcctggtttatcaaaccaaag
gcggcaaaagacgtccgctccgaactgcccgaatacgaactgccgaaaggctggttctgg
cgcgtcatctggcgcttccgccgctactactaccaagtcatcatcgccaccttcctcatc
aacttcctcgcgctggtcagctcgctctacgtgatgaacgtctatgaccgcgtcatcccg
aacaaatccatggaaaccctgtgggtgctgagcattggcgtctcgctcgccatcttcttc
gaatttctcgccaaactcatccgcgggcatctcaccgacatcgcgggcaaaaaagccgac
ctcatcatctccgccgcgcttttccgccgcgtcatgcagctgcgcatggcagacaaaccc
gcctcctccggctcctacgccaacaacctgcgcgacttcgaatccgtgcgcgacttcatg
accagcgctagcctgctcgccttcgtcgatatgccgttcttcctgctattcatcaccgtg
atgcacatggttgccggccaacttgccgtagtaccgctgaccatcatcccgatcgtcgtc
atcgctggcattctcgcgcaattcccgctggcgcgctccatcaacgaatccatgcgcgaa
tcctcgcagcggcaaggactggcggtggaagccatcgaaggcgtggaaaccctgaaagta
aacaacgccttcagctgggcgcagcgccgctgggacgcctacaccgcgaaaaccgccgcc
tccagcatcaaaacgcgcgacatcagcaacttcgttaccagcttctccgccgccatccag
caattaaacaccgtcatcctcgtcgtttacggcacctacctcatccacgccgaaaacgtc
cacgaccgcatcaccatgggggcgctcatcgcctgtgtcatcctctccggccgcgctctc
ggcccagtcgcacaaatcgccggccttgcagtgcgcttccagcaggcgcgtctcgccctg
caaggggtaaacaacatcacccgccgcccgattgagcgccatgccgaccgccaatacatc
accctcgaccaccccgaaggcaaaattggctttgaaaacgtcaccttcgcctacggcaaa
gaaggcaagcgggtactggacaacctcacgctcaacgtcaaggcgggcgaaaaaatcgcc
atcctaggccgcattggcagcggcaaatccaccctgctcaaactggctgccggattgtac
gaaccgcaaaacggcatggtcagcctggatgacgttgacgagcgacaaatcgacccgtac
ttcctgcgcagcgaagtagcgctgcttgcgcaatcaccgcgactcttcctcggtaccctg
cgcgaaaacctagacctcgcccgctccgacggcttctacagcgacgaaatcctcctgaac
gcactgaagcgcttcggactggagcgcctgatacaaggacacccgcacgggctggacatg
cagctgggcgaaaacggcgccggcctctccggcggacaacaacaaatcgtcagcctggcg
cgcctcaccctgcgcaacccgcgcgtggtactgctcgacgaaccgaccagcggccttgac
caaaacaccgaacaacaagtgctgcgcgcgcttgccgactgggtacgcgaccgcaccatg
atcgtcgtcacccaccgtccgcaaatcctcatgctggtggaccgcatcatcgtcatggag
cagggacaaatcgtcatggacggcccgaaacaagccgtactcgaccgtctgagcggccgc
cctgccaccccgccgggcgcgcctgccgcacaaccagcccccgtcgccggacacggcaaa
caagaaactatctga
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