Cardiobacterium hominis: NCTC10426_01826
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Entry
NCTC10426_01826 CDS
T05791
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chj
Cardiobacterium hominis
Pathway
chj03420
Nucleotide excision repair
chj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC10426_01826 (uvrD)
03430 Mismatch repair
NCTC10426_01826 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chj03400
]
NCTC10426_01826 (uvrD)
Enzymes [BR:
chj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10426_01826 (uvrD)
DNA repair and recombination proteins [BR:
chj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10426_01826 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NCTC10426_01826 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VEG77769
LinkDB
All DBs
Position
1:complement(1924681..1926852)
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AA seq
723 aa
AA seq
DB search
MDVSEILQGLNERQREAVTHPARAMRVIAGAGSGKTRVLVQRMQWLMAVEGVSPYGLLAL
TFTNKAAREMRQRLEAALQRPLGQLWMGTFHGICHRILRRHALLMQWPEQFVIMDSDDQL
RLVKRMMRARQWDEAVMKPKNMVWQINAYKEEGLRAEDVPPTPHPGELAIREFYHDYEKL
CRQQGTMDFAELLLLTVELFTHHPEVLQNYQQRFQSVLVDEFQDTNALQYRLVQQLCAGG
AQLFVVGDDDQSIYGWRGARVENILQLERDFPALATVRLEQNYRSTQTILDAANAVIAQN
SNRLGKTLWSDGQRGAAVRIYPAINEMDEARYVCEHIQRWHADGGRYDESAILYRSNAQS
RVFEEMLLQHRLPYRVYGGLRFFERAEIKDALAYLRLARYRDDDGAVERIINTPTRGIGQ
KTLADLRQLAQQAGVPLWRILSDDAQIARHFSGRARNALREFVILIEQIAAKLAAEPSLK
KALETVVHDTGLYAALESEGSEQADARRENLDELINAGSYIDLSTDPDSDRIMDFLVDAA
LDAGDGQAEEGSDSVQLMTLHSAKGLEFPNVYIVGMEEGLFPTQRAIESPDKLEEERRLA
YVGMTRAERELTLCFAERRRFQGQENYPQPSRFIHEIPEELTEAVRPMVYSGISKMRRMD
SASPRTASPAAPYKLGDSVRHPKFGEGCVMALEGHGEHLRAQIHFAEAGEKWLVLAYAKL
EKI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtcagcgaaatattgcaaggcctgaacgagcgccaacgcgaagcggtcacccat
ccggcgcgcgccatgcgggtgattgccggagcgggtagcggcaagacgcgcgtgctggtg
cagcgcatgcagtggctgatggcggttgagggcgtgtcgccttacggcctcttggcgctg
acctttaccaacaaggcagcgcgtgaaatgcggcagcggctggaagcggcgttgcagcgc
ccgctggggcagttgtggatgggcacttttcacggcatttgccaccgcatcctgcgccgt
cacgccctgctgatgcagtggccggagcagttcgtcatcatggacagcgacgaccagctg
cgtctggtaaagcggatgatgcgcgcgcgccagtgggatgaagcggtgatgaagccgaaa
aacatggtctggcaaatcaatgcttataaagaagaaggcctgcgcgccgaagacgtgccg
ccgacgccgcatccgggggagctggccatccgcgagttctaccacgactacgaaaaactt
tgccgccagcagggcacgatggattttgccgaactgctgctgctgaccgttgagctcttc
acccaccaccccgaggtactgcaaaactatcagcagcgttttcaaagcgtgctggtggac
gaatttcaggacaccaacgccctgcaataccgcctggtacaacaactgtgcgcgggcggg
gcgcagctgttcgtcgtcggtgatgacgaccaatccatctacggctggcgcggcgcgcgt
gtcgaaaacatcctgcaactggaacgcgattttccggcactcgccaccgtccgtctcgaa
caaaactaccgctcaacccaaaccatccttgatgccgccaacgccgtcatcgcacaaaac
agcaaccgcctcggcaaaaccctgtggagcgacggccagcgcggcgcagcggtacgcatc
taccccgccatcaacgaaatggacgaagcgcgctacgtctgcgagcacatccagcgctgg
catgcagacggcggccgctacgacgaaagcgccatcctctaccgctccaacgcccaatcg
cgcgttttcgaagaaatgctcttgcaacaccgcctgccgtaccgcgtttacggcggcctg
cgcttcttcgaacgcgccgaaatcaaggacgcgctcgcctacctgcgtctcgcccgctac
cgtgacgacgacggcgccgttgagcgcatcatcaacaccccgacgcgcggcatcggacaa
aaaaccctggcagacctgcgccaactcgcccaacaagcgggcgtaccgctgtggcgcatc
ctcagcgacgacgcgcaaatcgcccgccacttcagcggtcgtgcgcgcaacgccctgcgc
gaattcgtcattctcatcgaacaaatcgccgccaaactcgccgccgagccctcgctgaaa
aaagcgctggaaaccgtcgtccatgacacaggcctctacgccgcgctcgaaagcgaaggc
agcgaacaagcagacgcgcgccgcgaaaacctggacgaactcatcaacgccggcagctac
atcgacctcagcaccgacccggacagcgaccgcatcatggacttcttggtcgacgcggcg
ctggatgcgggcgacggccaggccgaagaaggcagcgacagcgtgcagctgatgaccctg
cacagcgccaaaggcctcgaattcccgaacgtctatatcgttggcatggaagaaggccta
ttcccgacgcagcgcgccatcgaaagcccggacaaactcgaagaagaacggcggctggcc
tacgtcggcatgacccgtgccgaacgcgaactcactctctgcttcgccgagcgccgccgc
ttccagggacaagaaaactacccgcagccctcgcgcttcatccacgaaatcccggaagaa
ctgaccgaagcggtgcggccgatggtctatagcggcatcagcaaaatgcgccgcatggac
agcgcctccccgcgcaccgccagccccgccgcgccctacaagctcggcgacagcgtgcgc
caccccaaattcggcgaaggctgcgtaatggcgctggaaggccacggcgagcatctgcgc
gcgcaaatccatttcgcggaagcgggtgaaaaatggctggtactcgcctatgccaagctg
gagaaaatttga
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