Cardiobacterium hominis: NCTC10426_02047
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Entry
NCTC10426_02047 CDS
T05791
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
chj
Cardiobacterium hominis
Brite
KEGG Orthology (KO) [BR:
chj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chj03400
]
NCTC10426_02047 (sbcD)
DNA repair and recombination proteins [BR:
chj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC10426_02047 (sbcD)
Archaeal homologous recombinant proteins
NCTC10426_02047 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
VEG77986
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All DBs
Position
1:complement(2169448..2170659)
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AA seq
403 aa
AA seq
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MKLLHTADIHLGRHLYGRRRHHEFAAFLDWLAAILDAEHIDALVIAGDIFDTATPSPRSQ
AQYYQFLCRIAAGNCRHVIITAGNHDSPAFLDAPRDILRALNVHVIGAAREPADEVLLLR
DRDGAPEAIICAVPYLRERDLRTADAGESLAEKAGKLLDGIRAHYTAAVAHAETLRAAHG
ADLPLIATGHLYTAGGQTSEAHDHEIGTLAHVPASAFPAAIDYLALGHIHLAQRLDSNET
RRYSGSPLPHTFAEAAQNKTVCLVTFQGRSAAVRPLAVPDFQKRARLRGDLPALEAQINE
LAATGDNIWLEIHYEGEAVEGGLRDRLHALTADTPLEILRLKNERIRERVLTQNTDSETL
DDLNPLDVFERCLAAHHISADQRDALRQNYREILAGLDDDRPQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactcctgcacaccgccgacatccacctcggccgccacctctacggccgccgtcgc
catcacgaatttgccgccttcctcgactggcttgccgctatcctggacgccgaacacatc
gacgcgctcgtcatcgccggcgacatcttcgacaccgccacgccgtcgccacgcagccag
gcgcagtattaccaattcctctgtcgcatcgccgccggaaactgccgccacgtcatcatc
accgcgggcaaccacgactcgcctgccttcctcgacgccccgcgcgacatcctgcgcgcg
ctgaacgtccacgtcatcggcgccgcgcgcgaacccgccgacgaagtactactcctgcgc
gaccgcgacggcgcgccggaagccatcatctgcgccgtaccctacctgcgcgaacgcgac
ctgcgcacggcagacgcgggcgaaagccttgccgaaaaagcgggcaaactgctggacggc
atccgcgcccactacaccgccgccgtcgcccacgccgaaaccctgcgcgccgcgcatggc
gccgacctaccgctcatcgccaccggccacctctacaccgcgggcggacaaaccagcgaa
gcacacgaccacgaaatcggcaccctggcgcacgtcccggcgagcgcctttcccgccgcc
atcgactaccttgccctggggcacatccacctcgcacaacggctcgacagcaacgaaaca
cggcgctacagcggctcaccgctaccgcacaccttcgccgaagccgcacaaaacaaaacc
gtctgcctcgttaccttccagggaagaagcgccgccgtccgcccgctcgccgtgcccgac
ttccaaaaacgcgcacgcctgcgcggcgacctgcccgcccttgaggcgcaaataaacgaa
ctcgcggcaacgggcgacaacatctggctggaaatccactacgaaggcgaggccgtagaa
ggcggcctgcgcgaccgcctgcacgcactgaccgccgacacaccacttgaaatcctgcgc
ctgaaaaacgagcgcatccgcgagcgcgtcctcacacaaaacacagacagcgaaaccctg
gacgacctcaacccgctggacgtcttcgaacgctgcctcgccgcacaccacatctccgcc
gaccagcgcgacgccctgcgccagaattaccgcgaaatactcgccgggctggacgacgac
cgcccccagtag
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