Chryseolinea soli: D4L85_02155
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Entry
D4L85_02155 CDS
T05641
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
chk
Chryseolinea soli
Pathway
chk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D4L85_02155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chk03019
]
D4L85_02155
03009 Ribosome biogenesis [BR:
chk03009
]
D4L85_02155
Enzymes [BR:
chk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D4L85_02155
Messenger RNA biogenesis [BR:
chk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D4L85_02155
Ribosome biogenesis [BR:
chk03009
]
Prokaryotic type
rRNA helicases
D4L85_02155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
FlgT_C
Cas3-like_C_2
RecG_N
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AYB29457
UniProt:
A0A385SGN5
LinkDB
All DBs
Position
complement(568665..570389)
Genome browser
AA seq
574 aa
AA seq
DB search
MKSFESLGLSKGLVESVLQIGFETPTPIQEKAIPVLLKGNRDFVGLAQTGTGKTAAFGLP
LLDLVDDARRDTQALVLAPTRELGLQIANDLENFSEKFKAFNIVAVYGGSSISEQIRKVK
KGAQIIVATPGRLIDLIDRKAINLGTIQYVVLDEADEMLNMGFKEDLDKILSFTPETKNT
WLFSATMPREVKSIMKNYMSDPFELTVGEQNTGNVNIEHNYVMVQERDKYPALKRILDDN
PDIFGLIFCRTRIDTQRIAEMLMKDSYNADALHGDLTQQQRDRVMMKFRSRTLQILVATD
VAARGIDVEDITHVIHMNIPDEMEFYTHRSGRTARAGKKGISIAMISRRELGKVKQIEKT
LKSPFKRMMVPTGANVCQKQLLALMHKVREVKVNEEEIAEFLPAVYEELKDLTKPELIKR
FASIEFNRFLDYYRNAPDLNQDDRGRSSSDGEGERYITGSRFFINLGKMDGMEKGDMLSL
IDETSGVSKQHIGRIELKGAYSFFEVEKEKVNDIVNGFQGIEYKGRQVRVEVTERKDGGG
REGGTRDYKRGKPSTGGYAKKSNNKYAEQKRKRY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttttgaatccttgggcctgtccaagggactggtagagtcggtgctgcaaatc
ggctttgaaacccccactcccatacaggaaaaagctatccctgtcttattaaaaggaaac
cgtgattttgtaggtctcgcacaaaccggaaccggcaagaccgccgcgtttggtctgccc
ctgctcgatttagtggacgatgcccgtcgcgatacacaggctttagtactggcacccacc
cgtgagttgggcttgcagattgctaatgacctcgaaaatttctccgaaaaattcaaggcc
tttaatatcgtagccgtatacggtggctccagcatcagtgagcaaatacggaaagtgaaa
aaaggagcccagatcatcgtggccacccccggtcgcctcatcgaccttatcgaccgcaag
gccatcaacctcggcaccattcaatacgtggtgctggacgaggccgacgaaatgttgaac
atgggctttaaggaagacctcgacaagatcctttccttcacccccgaaaccaagaacacc
tggttgttctcggccaccatgccccgcgaagtgaagtcgatcatgaagaactacatgagc
gaccccttcgagctgaccgttggcgagcaaaacaccggcaacgtcaacatcgagcacaac
tatgtgatggtgcaggagcgcgacaaataccccgccctgaaacgcatcctcgacgacaac
cccgacatcttcggcctcatcttctgccgcacccgcatcgacacccagcgcatcgccgaa
atgttgatgaaggacagctacaacgccgacgccctgcacggtgacctcacccaacagcag
cgcgaccgcgtgatgatgaagttccgctcacgcaccctccagatcctggtggccaccgac
gtagccgcccgcggcatcgacgtggaagacatcacacacgtgatccacatgaacatcccc
gacgaaatggagttctacacccaccgcagcggccgcacagcccgcgccggtaagaagggt
atcagcatcgccatgatcagccgccgcgagctgggcaaagtgaagcagatcgagaagaca
ttgaagtcgcctttcaagcgcatgatggtgcccacaggtgccaacgtatgccagaaacaa
ttgctggccctcatgcacaaagtgcgcgaagtaaaggtgaacgaagaagagatcgccgaa
tttttacccgccgtatacgaagagctgaaagacctgaccaagcccgaactgatcaaacgt
tttgcttccatagaattcaaccgcttcctcgactactaccgcaacgcgcccgacctgaac
caggacgatcgcggccgtagcagcagcgatggcgaaggcgagcgctacatcaccggcagc
cgcttcttcatcaacctcggcaaaatggacggcatggaaaagggcgacatgctctccctg
atcgacgaaaccagcggtgtgagcaaacaacacatcggccgcatcgaactgaaaggcgct
tactctttctttgaagtagaaaaagaaaaagtaaacgacatcgtcaacggcttccaaggc
atcgaatacaaaggacgccaggtccgcgtagaagtaaccgaacgcaaagacggtggtggc
cgcgaaggcggcacccgcgattacaaacgcggaaagccgtcgacgggtgggtatgcaaag
aagagcaacaataaatacgccgagcaaaagcgcaagcggtattga
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