Chryseolinea soli: D4L85_04160
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Entry
D4L85_04160 CDS
T05641
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chk
Chryseolinea soli
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chk03032
]
D4L85_04160
03400 DNA repair and recombination proteins [BR:
chk03400
]
D4L85_04160
Enzymes [BR:
chk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D4L85_04160
DNA replication proteins [BR:
chk03032
]
Prokaryotic type
DNA Topoisomerases
D4L85_04160
DNA repair and recombination proteins [BR:
chk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D4L85_04160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AYB29821
UniProt:
A0A385SH91
LinkDB
All DBs
Position
complement(1012824..1013906)
Genome browser
AA seq
360 aa
AA seq
DB search
MQVVPISITRAESIKIHRDHKRAAAVASLRYVGDAMPGIRRQKKGACFSYLQDGRPVKDK
DTLQRIRKLAIPPAWTRVWICAQENGHIQATGYDVRGRKQYKYHAQWSTIRNQTKFHRLY
EFGKTLPALRQRIERDICASSLTKEKVLATVVSLMERTFIRVGNNEYEKLYGSYGLTTLK
DGHVNITGATLKFSFKGKKGIYHTVTLKSKRLARIVKACRDIPGKELFQYINDEGVRCTI
DSGMINNYIKEASGNDFSAKDFRTWAGTLSMLNSFKSLGEALTPAETKKNVLQALDEVSA
KLGNTRAICRKYYVHPRIIALYEENGLQKYLSQLEDIEACDGLVDLTPDEKVLMRILQKV
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttgtgccgatctccatcacccgcgccgagtcgatcaaaattcatcgcgaccac
aagcgtgccgcggccgtagccagcttgcgctacgtgggcgacgccatgcccggcatccgg
agacaaaagaagggagcatgtttcagttacttgcaagatggtcgtcctgtgaaagacaag
gacacgttgcaacgcattcgcaaactggcgatacctcctgcgtggacaagggtatggatc
tgcgcgcaagagaacggccacatccaggccacgggctatgatgtgcgcggcaggaagcaa
tacaagtaccacgcgcagtggagcaccatccgaaaccagaccaagttccaccggctttat
gaatttggcaaaacattgcccgccctgcgtcaacgcatcgagcgcgatatctgtgcctcc
agcctcaccaaggaaaaagtgctggccacggtggtgagcctcatggaacggacgtttatt
cgcgtgggcaataatgaatatgaaaagttgtatgggtcctatggattgaccaccctcaag
gatggccacgtgaacataaccggagccacgctcaaattttcgttcaaaggaaaaaaaggg
atttatcacaccgtgaccctaaaaagcaaacggttggcccgcatcgtgaaggcctgccgc
gacattcccgggaaagagttgtttcaatacatcaacgacgaaggcgttcgctgtaccatc
gattccggcatgatcaacaactatattaaggaggcctccggcaatgatttttccgccaag
gattttcgcacctgggccggaacgttgtcgatgttgaattccttcaaatcgttgggagag
gccctgacgccagccgaaaccaagaaaaatgtcttgcaggctttggatgaggtgagcgcc
aaattgggcaacacccgcgccatatgccgcaaatattatgtacacccgcggatcatcgcg
ctctatgaagaaaacggtctgcagaaatatctctcccagttggaagacatcgaagcctgc
gacgggctggtggatctcacaccggatgaaaaagtattgatgcggattttacagaaggtc
tag
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