Chryseolinea soli: D4L85_12070
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Entry
D4L85_12070 CDS
T05641
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
chk
Chryseolinea soli
Pathway
chk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D4L85_12070 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chk03021
]
D4L85_12070 (rpoC)
03400 DNA repair and recombination proteins [BR:
chk03400
]
D4L85_12070 (rpoC)
Enzymes [BR:
chk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D4L85_12070 (rpoC)
Transcription machinery [BR:
chk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D4L85_12070 (rpoC)
DNA repair and recombination proteins [BR:
chk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D4L85_12070 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AYB31267
UniProt:
A0A385SLV6
LinkDB
All DBs
Position
2792555..2796871
Genome browser
AA seq
1438 aa
AA seq
DB search
MSFRKNKKINSDFSKITISLASPESILESSHGEVTQPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFRSLPNKI
GYLLGLATKKLDQIIYYERYVVIQPGMKEEDGVKRLDFLTEEEYLDIIDKLPRENQLLDD
NDPKKFIAKMGADALEMLLSRTQLDTLSYDLRHQAATDTSQQRKAEALKRLKVVEAFRDA
RTRIENKPEWMVIKMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIDIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRSDGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKDMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDP
VIWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGQEAILEASMLMLSSHNILNPANGAPITVPSQDMVLGLYYLTKGRKSTPDNLIK
GEGKSYYSAEEIIVAFNEGKLSKHANVKVRAKVRDKKTGELSTKMIETVAGRVIFNQYVP
EEVGFVDELLTKKKLQTIIADVFKAAGQSKAAKFLDDIKELGFQMAYKGGLSMGLNDVKV
PDEKPKLVANAQEEVDSVWNNYMMGLITDNERYNQVIDIWTRTNTLLTNTLMKQLEEDQQ
GFNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKNLAGSVGSIIENPILSNFKEGLDVL
EYFISTHGARKGLADTALKTADAGYLTRRLVDVAQDLVITEEDCGTLRGLKVTALKDNED
IVEPLSERIVGRTTVHSIYDPLSDEMICDANQEITDELAKVIEDAGIEEVEIRSLLTCES
RIGGCAKCYGRNLATGKMVQSGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAVEANI
KAKFAGVLEFEGIRVIETTDRDDKPVKVVMGRTGEIRILDKEKNRVLITNHVPYGAFLKV
EDGQKVEKGDEFCFWDPYNAVILSEFDGTIEYESIIEGITYKEESDEQTGHREKVITDTR
DKTKNPAIVVKGKTDTKGYNIPVGAHLAVDAGEKIKAGQVLAKIPRTMGKSRDITGGLPR
VTELFEARNPSNPAVVSEIDGVVTYGGIKRGNREIFIESRDGVQKRYLVPLSKHILVQDN
DFVKAGQPLSDGSITPSDILSIKGPTAVQEYLVNEIQEVYRLQGVKINDKHIEAIVSQMM
QKVEIIDPGDTSFLTNEYVDKLQFREDNDTVLDKKVVIDAGDSPNLKAGQIITAREFRDE
NSVLRRKDQKLVEVRDAMPAVSRPTLQGITQASLKTESWLSAASFQETTKVLSEAAIRGK
TDWLMGLKENVIVGHLIPAGTGQRKYNDIIVTHKDEYDAMQASASREKSRDREKELQD
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcagaaaaaataaaaagatcaacagcgacttctcaaagatcaccatcagcttg
gcttctcctgaatcgattctggaaagctcgcatggtgaagtaacgcaacccgaaaccatc
aactacagaacctacaagcctgaaatgggcggtctgttctgcgagcggatcttcggtccc
gtgaaggattgggaatgtcattgcggtaagtataaaagaattcgttacaagggtatcatc
tgcgatcgctgcggtgttgaagtaaccgagaagaaggttcgtcgcgagcgcatgggccac
atcgagctggtggtacctgtagcacacatctggtatttccgttccttgcccaacaagatc
ggctacctgctgggtcttgccaccaagaaactggatcagatcatctactacgaacggtac
gtggtgatccaacccggtatgaaagaagaagatggcgtgaagagactcgacttcctcacg
gaagaagaatacctcgacatcatcgacaaacttccccgcgaaaatcaattgctggatgac
aacgatccgaagaaattcatcgccaaaatgggtgctgatgctttggaaatgttgttgagc
agaacacaactcgatacactttcttatgacctgcgtcaccaggccgctaccgatacgtca
caacaacgtaaggcagaagcgttgaagcgtctgaaagtggtagaagctttccgcgatgcc
cgcacacgcatcgagaacaaacccgaatggatggtgatcaagatggttcccgtaattccc
ccggaattgcgtccccttgtacccctggatggcggccgtttcgctacgtcggatttgaac
gatctgtatcgtcgcgtgatcatccgcaacaaccgtctcaagagactcatcgatatcaaa
gctcctgaagtaattctccgcaacgagaaacgcatgctccaggaagccgtagactctttg
ttcgacaactcccgtaaagtgaacgccgtgcgttccgatggaaaccgcgccctgaaatcg
ttgagcgatatgctcaaaggtaaacaaggtcgcttccgtcaaaacttgctcggtaagcgt
gtcgactactccggtcgttcggttatcgtggtaggtcctgaattgaaattgcacgaatgc
ggtctgcccaaagacatggcggccgaattgttcaagccgttcatcatccgcaagctcatc
gaaagaggtattgtgaagacggtgaagtcggccaagaagatcgtggaccgcaaggatcct
gtgatctgggatattttggaaaacgtattgaaaggacaccccgttcttttgaaccgcgct
cctacgctccacagattgggtatccaggctttccaaccgaaactgatcgaaggaaaagct
atccagttgcacccgctcgtgtgtacggccttcaacgccgacttcgacggtgaccagatg
gctgttcacgttcccctgggacaagaagcgatcctggaagcgtctatgctgatgctttct
tcgcacaacatcttgaaccctgcgaacggcgccccgatcaccgtaccttcccaagacatg
gtgttgggtctctactacctcaccaaaggcagaaagagcacgcccgacaacctgatcaaa
ggcgaaggcaagtcctactattccgcagaagaaatcatcgtggcattcaacgaaggcaag
ctgtccaagcacgccaacgtgaaagtgcgcgcgaaagtaagagataagaaaaccggcgag
ctgagtacgaagatgatcgagaccgttgcaggtcgcgtgatcttcaaccagtacgtgccg
gaagaagtaggcttcgtagacgaactgctcacgaagaagaaacttcaaaccatcatcgcc
gatgtattcaaggctgcaggtcaatccaaagccgcgaagttcctcgatgatattaaagaa
ctcggtttccagatggcctacaaaggcggtctttccatgggcttgaacgacgtgaaagtt
ccggacgaaaaacccaaactggtagccaacgcacaggaagaagtagacagcgtgtggaac
aactacatgatgggtcttatcacggacaacgagcgttacaaccaggtgatcgacatctgg
acccgtaccaacacgttgctcaccaacacgctgatgaagcagttggaagaagaccagcaa
gggttcaactccatctacatgatgatgcactccggtgcccgcggttcgcgcgaacagatc
cgtcagttgggcggtatgcgcggtctgatggccaagcctcagaaaaacctcgccggctct
gtgggatcgatcatcgaaaacccgatcctttccaacttcaaagaaggactggacgtgttg
gagtacttcatctccacccacggtgcgcgtaaaggtcttgccgataccgctttgaaaacg
gccgatgccggatacctgacccgtcgtttggtcgacgtagcccaggatcttgtgatcacc
gaagaagattgcggcacactgcgcggtttgaaagtaacagcactgaaagacaacgaagat
atcgtagagcctttgtcggaaagaatcgtaggacgtaccacggtacactccatctacgat
ccgctgtccgatgaaatgatctgtgatgctaaccaagagatcaccgacgaactggcaaaa
gttatcgaagacgccggtatcgaagaagtggagatccgttctttgctcacatgtgagtcg
agaattggcggatgcgcgaaatgctatggccgtaacctggctactggcaaaatggtgcag
tccggcgaagcggtgggggttattgcagcccaatccatcggtgagcccggtacacagctt
accctccgtacgttccacgtagggggtactgcatcgaacatcgcggttgaagctaacatc
aaagcgaaattcgctggcgtgcttgaattcgaaggtatccgcgtgatcgaaaccaccgac
cgtgatgacaaacctgtgaaggttgtgatgggtcgtaccggtgagatccgcatcctggat
aaagaaaagaacagagtgctcatcaccaaccacgttccttacggtgccttcctgaaagtg
gaagacggccagaaggtagagaaaggcgacgagttctgcttctgggatccttacaacgcc
gtgatcctttccgagttcgacggtactattgagtacgagtcgatcatcgagggtatcacc
tacaaggaggaatccgatgagcaaaccggtcaccgcgaaaaggttattaccgatacgcgt
gataagaccaagaacccggcgatcgtggtgaaaggtaaaaccgacaccaaaggctataac
attcccgtaggcgcccacttagcggtggatgctggcgagaagatcaaagctggtcaggta
ttggccaagatccctcgtacgatgggtaaatcaagggatatcacagggggtctgccccgc
gtaacggaattgttcgaagcgcgtaacccttctaacccggctgtagtgagcgagatcgac
ggcgtagtgacctatggtggtatcaaacgcggtaaccgcgagatcttcatcgaatcgcgc
gacggtgttcagaaacgctacctggtgccgctgtccaagcacatcctggtacaggacaac
gactttgtgaaagcgggtcaaccgttgtccgacggttccatcacaccctccgatatcctt
tctatcaaaggccctacggcggtgcaagagtacctggtgaacgagatccaggaagtatac
cgtctgcaaggtgtgaagatcaacgacaagcacatcgaggccatcgtaagccagatgatg
cagaaagtggagatcatcgatccgggagacaccagcttcctcacaaacgaatacgtagac
aagctgcaattccgtgaagacaacgacacggtgttggataagaaagtggtgatcgacgca
ggcgattccccgaacctgaaagcaggccagatcatcacggcccgcgaattcagagacgag
aattccgtgctccgcagaaaggatcagaaattggttgaggttcgcgacgcgatgcctgcc
gtttccagacctacgctgcaaggtatcacccaggcctcgttgaagacggaaagctggctg
tcggccgcatccttccaggaaacgacgaaggtactcagcgaagccgccatccgcggaaaa
accgactggttgatgggcttgaaggagaacgtgatcgtaggtcacctcatccctgccggt
accggtcagcgcaagtacaatgacatcatcgtgacccacaaggacgagtatgatgccatg
caggcctccgcatcgcgcgaaaagagccgcgaccgcgagaaagaactacaggattaa
DBGET
integrated database retrieval system
