Chryseolinea soli: D4L85_13110
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Entry
D4L85_13110 CDS
T05641
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chk
Chryseolinea soli
Pathway
chk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D4L85_13110 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chk03019
]
D4L85_13110 (recQ)
03400 DNA repair and recombination proteins [BR:
chk03400
]
D4L85_13110 (recQ)
Enzymes [BR:
chk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D4L85_13110 (recQ)
Messenger RNA biogenesis [BR:
chk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D4L85_13110 (recQ)
DNA repair and recombination proteins [BR:
chk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D4L85_13110 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AYB31460
UniProt:
A0A385SPN4
LinkDB
All DBs
Position
complement(3042105..3044258)
Genome browser
AA seq
717 aa
AA seq
DB search
MSPLEILRTRFGYSSFRLEQEAIIQSVLQRKDTFVLMPTGGGKSLCYQVPALLLDGLTVV
ISPLIALMKDQVDALRLNGVQAAYLNSTQSGAEQDAIITKVLSKEMKLLYLAPESSFFRR
LGSFNVSLVAVDEAHCISHWGHDFRPEYLLLNQLKQTLPDVPVIALTATADKVTQRDIIE
KLALRSPAVFVSSFNRANIRYTVEPKKRSFEKLLGFLETRKEESGIIYCLSRVATESLAA
DLAKEAFNVLPYHAGMEKEQRARHQEMFLRDDVKIMVATIAFGMGIDKSNVRYVVHMDLP
KNIESYYQETGRAGRDGLESEALLYYTYADVSKMKKFVEIEGNAEQTRIYLKKLDQMATY
GDLVTCRRQYLLNYFDEPAPSYCGNCDICLTQVEREEGTVQAQKVLSAVTRLQERFGTNY
VIDVLRGSNSAKIMDDHRALKTFGVGADTSKEEWTSIIRDLLAQGYLAKSDGTYPVLKLT
AKSAAVLRGAERVMLVRSKEKLPTPMMQVSEQSADYEAGLFMILKKVRTALAQEENVPPY
VVLSDASLRELATYLPLDRASMRNISGFGELKVERYGPAFEDAIVRYCEENGMATRMHLK
SPKRTSGRRDRPERPQRENETKQQTLDLFKAGHLPGDIAALRSLSVGTVENHLAYYVQYG
KLSVEELVRPAKIATIQLAIEQVGGKMLAPIKEKLGAGFTYGEIKAVMAYLEFKATS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctttagaaattcttcggacccgtttcgggtattcttcctttcgtttggaacag
gaagccatcatccagtctgttcttcagcgaaaagatacgtttgtgttgatgcccaccggc
ggtggcaagtcgctgtgttaccaggtgcctgcgctgttgctcgatggactcaccgtggtg
atctctccgctcatcgccctgatgaaagatcaggtcgatgccttgcggctgaacggcgta
caggccgcgtacctcaattccacgcaaagtggcgcggagcaggatgcgatcatcaccaag
gtgttgtcaaaagaaatgaagctgttgtacctcgcgcccgaaagctcgtttttccggcgt
ctcggttcgttcaatgtgagcctggtggccgttgacgaggcacactgcatttcgcattgg
ggtcatgattttcgcccggaatatttgttgctgaaccaactaaaacaaacgctacccgat
gtgcccgtgatcgccctgacggccaccgccgacaaggtgacgcaaagagacatcatcgaa
aaattagcattgcgctcgcccgccgtgtttgtgtcgagcttcaaccgggctaacatccgc
tacacggtggagccaaaaaaacggagcttcgaaaaattgttaggctttttggagacccgg
aaggaagaatcgggcatcatctattgcttgtcgcgcgtggcaacggagagcctggcggcc
gacctggcgaaggaagcgtttaatgtcctcccctatcacgccgggatggaaaaagaacag
cgggcacgacaccaggaaatgtttttgcgtgacgacgtgaaaattatggtagccaccatc
gcctttggcatgggcatcgacaaatcgaacgtgcgttacgtggtgcacatggacctcccg
aaaaatatcgagagctattaccaggaaacgggtcgcgccggacgcgacggtctggagagc
gaggccttgctctattatacctacgccgatgtgagcaagatgaaaaagtttgtcgagatc
gagggcaacgccgagcagacgcgcatctacctgaaaaagctcgaccagatggccacctat
ggcgacctggtgacgtgccggcgccaatacctgctaaactatttcgacgaacccgccccc
agctattgcggcaactgcgacatctgtctcacgcaagtcgaacgcgaagaaggcacggtg
caggcccagaaagtgctgtcggccgtgacgcgtttgcaggaacgattcggcaccaactat
gtgatcgacgttttgcgcggatcgaattccgcaaagatcatggacgaccaccgggcgctg
aaaacatttggcgtgggcgccgacaccagcaaagaagaatggaccagcattattcgcgac
ctgctggcacagggctacctggccaaatcggacggcacgtacccggtattgaaactgact
gctaaaagcgcggccgtattgcggggtgccgaacgcgtgatgttggtgcgatcgaaagag
aaactgcccacgccgatgatgcaagtttcagaacaatcagccgactatgaagcagggctt
tttatgatcctgaagaaagtgcggacagcgctggcgcaggaagagaatgtgccgccctat
gtggtgctgtcggatgcctcgttgcgcgaactggctacgtatctgcctttggatcgagca
tcgatgcggaatatttcgggttttggcgagttgaaagtggagcgctatggccccgcattt
gaagatgccattgtgcggtactgtgaagagaacggcatggctacgcgcatgcatctgaaa
tctccaaagcgcacgagcggtcgtagggaccggccggagcgcccgcaacgggaaaatgaa
accaaacaacaaaccctggatctgttcaaagccggtcatttgcccggcgacatcgcggcc
ttgcgcagcctgagtgtgggcacagtagaaaatcacctggcctactatgttcaatatgga
aagctttcggttgaggagcttgtgcgcccggcaaagattgcgaccattcagctcgccatc
gagcaagtgggtggaaaaatgctggcgccgatcaaagaaaagctgggcgcgggtttcacc
tacggagagatcaaagcggtgatggcctatttggaattcaaagctacttcgtag
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