Chryseolinea soli: D4L85_19080
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Entry
D4L85_19080 CDS
T05641
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chk
Chryseolinea soli
Pathway
chk03420
Nucleotide excision repair
chk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D4L85_19080
03430 Mismatch repair
D4L85_19080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chk03400
]
D4L85_19080
Enzymes [BR:
chk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D4L85_19080
DNA repair and recombination proteins [BR:
chk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D4L85_19080
MMR (mismatch excision repair)
Other MMR factors
D4L85_19080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_19
AAA_12
PhoH
DEAD
SLFN-g3_helicase
AAA_16
NACHT
Thoc2
AAA_30
Flavodoxin_1
Motif
Other DBs
NCBI-ProteinID:
AYB32549
UniProt:
A0A385SMY5
LinkDB
All DBs
Position
4453751..4455799
Genome browser
AA seq
682 aa
AA seq
DB search
MSFTAEQQEREYLEEIKEKLMFAIQRVDDRIKQFSTELRQNKEYIHEHQSGLDEADMVAA
GQSIDRMAFTGESAVARKRKLMKLRESPYFGRIDFEAYGGSEKTEVYIGIYTFFDETART
NLIYDWRAPISAMFYDFELGDATYTTPARTVKGEIVLKRQYKIAQGRMEFMIENAVNIHD
DILQKELSKSSDDKMKNIVATIQRDQNAVIRNETAPVMIIQGVAGSGKTSIALHRIAFLL
YRFRESIASKDILILSPNKVFADFISNVLPELGEEQIPEMEMEELAMEVLENKYSFQNFF
QQVAALLEHHDEAFIARVRSKSSFEFLRRLNQYLIHVENNYFDPTELHLAGVVVPFPFIL
ERFKAYHRIPLLKRFPEVIQDIQQYIRNQTKRKLSGQEKARLWEAIPRMLKFNNVLDLYK
DFYTWSGQPELFKRTSHGDLEYADVFPLIYFKIRLEGAQTYDHVKHLLVDEMQDYTPVQY
AVLSRLFKCKKTILGDVSQQVNPYSASDAEGIEQVFPQADTVKLFRSYRSTFEITAFAQR
LFFNPNLIAMERHGAPPAVTGFGSNAEEIEAIKKMVKQFEQSGFKSLGVICKTRQQAEFV
YREVKAHGIHLLTPDSTSFKEGIIITTAHLAKGLEFDEVIVPFASARNYQTEVDKRMLYI
ACTRAMHQLTLTYAAEPSAFIK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcaccgccgagcaacaagaacgcgaatacctggaagagatcaaggaaaaactg
atgtttgccatccaacgggtggacgaccgtataaagcagttttcgaccgaactcagacaa
aataaagagtacatccacgaacaccaatccggcctggacgaggccgacatggtggccgcc
ggccaatccatcgaccgcatggccttcaccggcgagtcggccgtggcccgtaaacggaag
ctgatgaagcttcgcgagtcgccctatttcggtcgcatcgattttgaggcgtatggggga
agcgagaaaaccgaagtatacattggcatctataccttttttgatgaaacggcgcggacc
aacctcatctacgattggcgtgcacctatttccgccatgttctatgattttgaattgggc
gatgccacctacacgacgccggcgagaaccgtgaaaggcgagatcgttttgaaacggcaa
tacaagatcgcacaaggccgcatggagttcatgatcgaaaacgccgtcaacatccacgac
gacattctgcagaaagagctcagcaagtccagcgacgacaagatgaagaacatcgtcgcc
accatccagcgcgatcaaaatgccgtcatccgcaatgagaccgcgccggtcatgatcatc
cagggtgtggcgggttcgggcaagacttccatcgccctgcaccgcatcgcgtttctgctc
tatcggtttcgcgagagcatcgcatcgaaagacattctcatcctctcgcccaacaaagtt
tttgccgacttcatctccaacgtattgcccgaattgggcgaagagcagatccccgagatg
gagatggaagaattggccatggaggtgttggaaaacaaatacagtttccagaattttttc
cagcaagtcgccgcactcctcgagcaccacgacgaagcgttcatcgcgcgcgtgcggtca
aaatcgtcgttcgaatttttgagacgcctcaaccagtacctcattcatgtggagaacaat
tattttgatcccaccgaattgcacctcgccggagtggtggtgcccttcccgtttatcctg
gagcggttcaaagcctatcatcgcattcccctgttgaaacgcttcccggaagtgatccag
gatatccagcagtacatccgcaatcagaccaagcgcaaattatccggacaagaaaaagcg
cggctttgggaggcgattccgcgcatgctgaaattcaacaacgtgctcgatctctacaag
gacttctacacctggtcgggccaacccgagctgttcaaaagaacttcccacggcgacctg
gaatatgcagacgttttccccctcatctatttcaagatcaggttggagggcgcgcagacc
tacgaccatgtgaagcacctgctggtggatgagatgcaggactacacgccggtgcaatac
gccgtgctgtcgcgattgttcaagtgcaagaagacgatcttgggtgatgtgagtcagcag
gtcaatccgtatagcgcttccgatgcggagggtatcgaacaagtgttcccccaggccgac
accgtaaaacttttcagaagctaccggtccaccttcgagatcacggcctttgcccagcgc
ttgttcttcaatcccaacctcattgccatggagcgtcacggcgcgccaccggctgtgacg
ggttttggcagcaatgccgaggaaatagaagccatcaaaaagatggtgaagcagttcgag
caatccggcttcaaatcgttgggcgtgatttgtaagacgcgccagcaagccgagtttgtc
taccgcgaagtgaaggcgcatggtatacacctgctcacacccgatagcacctccttcaag
gaaggcatcatcatcaccacagctcacctcgccaaaggtctggaattcgatgaagtgatc
gtgccctttgcttcggcgcgcaactatcaaaccgaagttgacaagcgcatgctttacatt
gcctgcacccgggcgatgcatcaattgacgcttacgtatgctgcggagccatcggcattc
ataaagtag
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