Chryseolinea soli: D4L85_25925
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Entry
D4L85_25925 CDS
T05641
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
chk
Chryseolinea soli
Pathway
chk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D4L85_25925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chk03021
]
D4L85_25925
Transcription machinery [BR:
chk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D4L85_25925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
Scm3
UPF0122
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AYB33805
UniProt:
A0A385SV06
LinkDB
All DBs
Position
complement(6188767..6189630)
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AA seq
287 aa
AA seq
DB search
MRQLKISKQITNRESQSLDKYLQEIGKVDLLTPDEEVELAKRIKEGDQIALEKLTKANLR
FVVSVAKQYQNQGLSLGDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNRVGSLNKISKTFSELEQKYEREPSPEELAEVLDVTTAEVVDTMKISGRHV
SMDAPFVQGEENSLLDVLENDSEETPDSGLMNDSLRREVQRALSTLTQREADVITLYFGL
NGEHSMTLEEIGEKFNLTRERVRQIKEKAIRRLRHTSRSKALKPYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagctaaagatcagtaaacaaattaccaaccgcgaaagccagtcactggataag
tacctccaggaaattggcaaggttgacctgcttacgccggacgaggaagtagagttggca
aagcgtatcaaggagggagatcaaatagcattagagaaacttacgaaggccaacctccgc
tttgtggtgtcggtggcaaaacaataccaaaatcagggactttccttaggtgatttgatc
aacgaaggaaacctgggtttgatcaaagccgcacaacgtttcgatgagacgcgtggtttt
aaatttatctcttatgccgtatggtggatccgtcaatccatccttcaggcgctggccgaa
caatcccgtattgttcgcttgcctttgaaccgcgtgggttccctgaataagatctccaaa
acgttttcggaattggaacagaagtacgagcgcgagccttccccggaagagcttgctgaa
gtgctggacgtgacaacggccgaggtagtggataccatgaagatctccggacgccacgtg
tccatggatgctccgttcgtgcaaggagaagaaaacagcctgctcgacgtgttggaaaac
gacagcgaagaaacaccggactccggtctgatgaacgactcgctgcgccgcgaagtgcaa
cgcgcactgtcgaccctgacccaacgcgaagccgatgtgatcactttatactttggactg
aatggcgaacactcgatgaccttggaagagatcggagagaagttcaatttgacccgcgaa
cgcgttcgtcagatcaaagaaaaggctatcagacggttacgtcacaccagcagaagcaaa
gctttaaagccttacctcggttaa
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