Chloroflexus aurantiacus Y-400-fl: Chy400_0325
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Entry
Chy400_0325 CDS
T00859
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chl03016
]
Chy400_0325
Enzymes [BR:
chl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Chy400_0325
Transfer RNA biogenesis [BR:
chl03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Chy400_0325
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ACM51764
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All DBs
Position
complement(390536..391108)
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AA seq
190 aa
AA seq
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MSQTPPAEPTLRLFIALELPQPVRDELKRIQQRLQGHSRAARWTDPTGMHLTLHFLGETP
ERLVEPLLTGLRSVSAPALSLTLDRLGCFPANGALRVVWVGLRGDLAALATLHRSLATVI
QSLGLPTETRPFVPHITLARARPNATAADLRALRTALDTVAPQSLTWQSDSPRLFRSQLT
PRGAVYTVLG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaaccccacctgctgaaccaaccctccgcctcttcatcgcgctcgaactgccg
cagccagtgcgcgatgagctgaagcgcattcaacaacgtttacaaggccacagccgggcc
gcacgctggacagacccaaccgggatgcacctgaccctacactttctcggcgaaacgccg
gagcgcctggttgaaccgttgctgaccggtttgcggtcggtatcggcacctgccctctcg
ctcaccctcgaccgcctgggctgttttccggccaacggcgccctgcgcgtggtctgggtt
ggcctgcgcggcgatctggcagcgcttgccaccctgcaccggtcactcgctacggtcatc
caatcgctcggcttaccgaccgaaacgcggccttttgtaccccacattaccctggctcgt
gcgcgacccaacgccacagccgccgatctgcgcgccctgcgcaccgcattggacaccgtt
gctccgcaatcgttgacctggcagagcgattcgccgcgcctcttccgcagccagttgacc
ccacgtggcgcggtgtatacggtgttgggataa
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