Chloroflexus aurantiacus Y-400-fl: Chy400_0890
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Entry
Chy400_0890 CDS
T00859
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Pathway
chl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Chy400_0890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chl03400
]
Chy400_0890
Enzymes [BR:
chl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Chy400_0890
DNA repair and recombination proteins [BR:
chl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Chy400_0890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
HHH_5
Viral_helicase1
AAA_22
UvrD-helicase
T2SSE
TraI_hel_assoc_N
NAT10_TcmA_helicase
PIF1
nSTAND3
nSTAND_NTPase5
AAA_16
AAA_28
TrwB_AAD_bind
MeaB
DEAD
SLFN-g3_helicase
AAA_29
SRP54
AAA
NTPase_1
NACHT
NPHP3_N
SAM_SMF
MobB
DUF1918
FtsK_SpoIIIE
Mg_chelatase
Aq_aa27
Motif
Other DBs
NCBI-ProteinID:
ACM52316
LinkDB
All DBs
Position
complement(1121638..1123815)
Genome browser
AA seq
725 aa
AA seq
DB search
MQQLDGTLERITFQSESDGYTVAQLRPLGKRHTVTIVGNLPGVQPGEQLSLEGEWRDHPT
HGRQFHVQRYRSRLPATVDGIRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERL
SEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGLPTGVAVRIYRHYGDDALRVVQQEP
YRLADEVDGVGFRTADAIAAGLGIARDDPQRIAAGLRYTLAQASDEGHCYLPAGELTRRA
ASLLSVTTAAVTDVFTQMVATNQLWRDPIVADPDPDRYPIYLPPLAFAEIGVANAIRRLI
QQRSSLAARYAPSRWNLVFAHLAERRGINLSDQQRRAVQTALTTPVMLLTGGPGTGKTTS
LRALVMLLQARGYRPLLAAPTGRAARRLSEATGLEARTIHRLLEYGPDGTFRRNAEYPLD
CDLLVIDEASMLDIVLANQLLKAIPAGAHLVIVGDADQLPSVGPGRVLGDVIESGVVPRV
HLDAIFRQAAGSGIAANARRINEGHLPEWGAHDDFYFFAAATPERCAALTVELVVERIPR
RFGFDPRRDIQVLSPTHKGVAGVAALNAALQAALNPPRPGVAEYHSGATIFRVGDRVIQQ
RNDYDRDVYNGDVGEIVAVDPTGPTVMVRFEDGRTIRYNGLDLDDLTLAYALSVHKSQGS
EYPVVVLPLLLSHQPLLQRNLIYTAVTRARQLVVIVGDRRAVEVAIAAANVERRYTGLSI
RLGRT
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcttgacggcaccctcgaacggatcacctttcagagtgagagcgatggctac
accgtggcccaacttcgtccgcttggcaaacgtcacacggtgacaattgtcggcaacctg
ccgggcgtacagcccggtgaacaactcagtctcgaaggtgaatggcgcgatcacccgacc
catggccggcagtttcacgtccagcgctaccggagccgtctgccagccacggttgatggt
attcgccgctatctgggcagcggcttgatcaagggtgtcgggccggtcctcgccaaacgg
atcactgaaacctttggcaagtacaccttagaggtgctggatcgcgaaccggagcgtctg
agcgaagtccccggtctggggcggaagaaggccgtgctgatcgccgaggcatggcgggcg
cagcagcgtatcaaagacctgatgttactcctgcaggacctgggtctgcctaccggggtt
gccgttcgtatctaccggcattacggcgatgacgctttgcgagtggtgcaacaggaaccg
taccgtctggccgatgaagttgatggggttgggtttcgtaccgctgacgccattgccgcc
ggtctcggcattgcccgcgatgatccgcagcggatcgctgccgggctgcgttatacgctg
gcacaggcttccgacgaagggcattgttacctgcccgccggtgaactgaccagacgcgct
gccagcctgctttcagtgacgactgctgcggtgacggatgtgtttacgcagatggtggca
accaatcagctttggcgcgatccaattgtggccgatcccgaccctgatcgctacccgatc
tacctgccgccgctggcatttgccgagattggggttgccaacgccattcgccgcctgatc
cagcaacgctcgtccctggctgcacgctatgcacctagccgctggaacctggtgtttgcc
catcttgccgaacggcgtgggatcaatctcagcgatcaacagcgccgtgcggtacagacg
gcgctgaccacaccggtcatgttgctcaccggtgggccggggacgggcaaaaccaccagc
ctgcgtgcgctggtcatgcttttacaggccagaggctatcgtccgctgctggcggcaccg
accggacgggcagcccggcgcttgagcgaggcgaccggcctggaagcccgcactattcac
cgtctgcttgaatatggccctgatggaacatttcgccgcaacgccgaatatcccctcgac
tgtgacctcctggtgatcgatgaagccagtatgctcgatattgtgctggccaatcagctc
ctgaaggcgatcccagccggtgcgcatctggtcatcgtgggggatgccgatcaattgccg
agtgttggccctggccgtgtgcttggtgatgtgatcgagagtggggttgtgccgcgggtg
catctcgatgcgatctttcgccaggctgccggcagtgggattgccgccaatgcgcgacgg
atcaacgaaggccaccttcccgaatggggtgcgcacgatgatttctacttctttgcagct
gcaacacccgaacggtgtgcggcgctgaccgtagagctggtggtagaacgcatcccgcgt
cggtttggatttgatcctcgtcgtgatattcaggtgctcagtccaacccacaaaggggtg
gccggagttgcggccctcaatgcagcattgcaggcagcgttgaacccaccgcgccccggt
gtcgccgaataccacagtggcgctaccatctttcgggtaggggatcgcgtcatccagcag
cggaacgattatgatcgggatgtctacaacggtgatgttggtgagattgtcgcggttgat
cccaccgggccaacagttatggtgcgctttgaggatggtcgaaccatccgttacaacggt
ctcgatctcgatgatctcaccctggcttacgccctcagcgtccacaaaagccagggaagt
gaatacccggttgtcgtccttcccctcctgctgtcccatcagccactgctgcaacgtaac
ctgatctacaccgcagtgacccgcgctcgccagcttgtcgtgatcgttggtgatcggcga
gcggttgaggtggcgattgccgcagccaatgttgaacgccgctacaccggcctgagcatt
cggctcggtagaacctga
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