Chloroflexus aurantiacus Y-400-fl: Chy400_1162
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Entry
Chy400_1162 CDS
T00859
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Pathway
chl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Chy400_1162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chl03400
]
Chy400_1162
DNA repair and recombination proteins [BR:
chl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Chy400_1162
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Chy400_1162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_16
AAA_22
AAA_30
AAA_5
AAA_25
AAA
nSTAND3
TrwB_AAD_bind
HGD-D
DUF87
Motif
Other DBs
NCBI-ProteinID:
ACM52583
LinkDB
All DBs
Position
1473570..1475564
Genome browser
AA seq
664 aa
AA seq
DB search
MSFRIEAPYQPTGDQPRAIEQLVAGLRAGYRHQTLLGATGTGKTFVMAHIFAQMQRPTLV
LAHNKTLVSQLWAEFREFLPDAAVEMFISYYDEYTPEAYVPSKDLYIEKEASINEEIDRL
RHAATQALLSRRDVLIVASVSAIFGLGSPHDYGQEKVTLRVGEVRNRDKLMRQLIDLQFE
RKDMDFQRGTFRVRGDTLDIIPANAETAIRVEFWGDEIERIVELDPLTGEVLCKHAVVEI
YPAKHFVTTKEKLQLAIASIQDELAERVRELEAAGKLLEAQRLKQRTLYDIEMLSEVGYC
SGIENYSRHLDGRAPGQTPWTLLDYFPDDFLIFIDESHITLPQLRGMYNGDRQRKQTLVD
FGFRLPSALDNRPLRFEEFEQHVYQVIYVSATPGPYEREKSEQIVEQIIRPTGLLDPEIE
VRPTRGQIDDLLGEIRRRVERKQRVLVTTLTKRMAEDLADYLKEMGVRTMYLHADIDTIE
RVEILRDLRLGVYDVVVGINLLREGLDLPEVSLVAILDADKEGYLRSETSLIQIIGRAAR
HIEGKVIMYADTITRSMEAAIRETQRRRDIQMAHNLRYNIKPQGIAKGVRDLTDRIRKMA
EERGEYVATPTTAVAVDLPRDEVLKLIKDLEKQMKQAAKELAFEKAAALRDQIVELRKTL
ALSE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccggatcgaagcgccttatcagcccaccggcgaccaaccgcgtgccattgag
caactggtggccggcctgcgtgccggttaccgtcatcaaaccctgctcggtgccaccgga
accggtaagacgtttgtcatggcgcacatcttcgcgcagatgcagcgcccaaccctggtt
cttgcccataataaaaccctcgtctcgcagctttgggctgagttccgcgagtttctgcct
gatgctgcggttgagatgtttatctcgtactacgatgagtacacgcccgaagcctacgtg
ccctcgaaagacctctacattgaaaaagaggccagcatcaacgaagagattgatcgcttg
cgccacgccgcaacccaggccctgctcagccggcgcgatgtgctgatcgtggcgtcagta
tcggcgatcttcggtctcggttcaccgcacgactacgggcaagagaaggtcacgctgcgc
gtcggtgaggtacgcaaccgcgataagctcatgcgccagttgatcgatttgcagttcgag
cgcaaggatatggattttcagcgcggcacgtttcgcgtgcgcggtgatacgctcgatatt
attccggccaacgccgaaaccgcgatccgggtggagttttggggtgatgagattgagcgg
attgtcgaacttgatccgctcaccggcgaggtgttgtgtaagcacgcggtggttgagatt
tatccggccaaacacttcgttaccaccaaagagaagttgcagcttgcgattgccagcatt
caagacgagctggccgaacgggtgcgcgaactggaggctgccggcaaattgctggaagcc
caacggctgaagcaacgcactctgtacgacatcgagatgctcagtgaggtaggctactgt
agtggcattgagaactattcccgccatctcgatggccgggcgcccggccagacgccctgg
acgttgcttgactattttcccgatgattttctgatctttattgacgagagccacattacg
cttccgcagttgcgcgggatgtacaacggtgaccgtcagcgcaagcagacgctggttgat
ttcggttttcgcctgccctcagcgctcgataaccgcccgctgcgctttgaagagttcgag
cagcatgtctaccaggtcatttatgtctcggcgacccccggcccttacgaacgcgagaag
agcgagcagattgtagagcagattattcggccaaccggcctgctcgacccggagatcgag
gtgcggccaacccgtggtcagattgatgatctgctcggtgagattcggcggcgggtggag
cgtaaacagcgcgtgttggtgaccacgctgaccaagcgcatggccgaagatttggccgac
tatctgaaagagatgggggtacgcacaatgtacctccacgccgacattgatacgattgag
cgggtggagattctgcgcgacctgcggctgggggtttacgatgtggtggtgggaattaac
ctgttgcgcgaggggcttgatctgccggaggtgagcctggtggcgatcctggacgcggat
aaagaggggtatctgcgctcagagacctcactgatccagatcattgggcgggcggctcgc
cacattgagggcaaggtgatcatgtacgccgatacgatcacccgctcgatggaggcggcc
atccgcgagacgcagcgccggcgcgatattcagatggcccacaacctgcgctacaacatc
aaaccgcaggggattgccaagggggtgcgcgatctgaccgaccggattcgcaagatggca
gaagagcgcggcgagtatgtggcgacgccaaccaccgccgttgcggtcgatctgccccgc
gatgaagtgctgaagttaatcaaagacctggaaaagcagatgaagcaggccgcgaaagag
cttgccttcgagaaggcggctgcattacgcgaccagatcgttgagttgcgcaaaacactg
gcgctgagtgagtga
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