Chloroflexus aurantiacus Y-400-fl: Chy400_2419
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Entry
Chy400_2419 CDS
T00859
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chl03400
]
Chy400_2419
DNA repair and recombination proteins [BR:
chl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Chy400_2419
Archaeal homologous recombinant proteins
Chy400_2419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
Rad50_zn_hook
AAA_27
Phage_GP20
AAA_21
ABC_tran
AAA_15
RsgA_GTPase
APG6_N
RNF220
MukB
RbsD_FucU
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACM53813
LinkDB
All DBs
Position
complement(3047330..3050428)
Genome browser
AA seq
1032 aa
AA seq
DB search
MIPLQLALRNFMCYRATENGDPLRLDLDGLHVLCLSGENGAGKSTLLDAITWALWGEARR
PDDDLITQGETEMMVELVFALDGRKYRVIRQRQRGRSSGRGTGAGKTWLDLQQFDGTTWR
PIGENTIRETQRKITELLRMSYTTFVNASFLLQGRADEFTSKTPAERKEVLAEILDLAEY
AELERRARERVRLLEADLIRVRGQLETLQPIANQVPFWQQAVAEAEQRQHTLQQQRTALE
AEFTQASEKLRHLEQEAHRQREVQNRIAILTGEIQRYSNELRELNARIAQAEQTIAQRPL
IEAGLAELHAARADLERLEQLRTRYDELMARKRELQQELKAELNLLNERLSHAIQQLDRL
YAEAQRLVGLQQRVAAIRQRLRELAPVHERLVQCQHQRTALEQHLNHIRDLVMRQRLLQN
QLEQQRNTLQSELNRSHQELARLDRQLSDVETWRNALRAAQDAQARVQILEAEQLNRRQQ
EQVVLDRLSAARAEAAQARRDIETLQTNQALLATGKGECPVCRRHLAANEADHVYAHYRQ
ELERLQAQETQAKAAIQAAEQELKQIRSTLTSTEQELTRLRQQAATIESLHHQLNQAATW
QTERDQLAQRIATLTGQLTTGSINPAVQAELDTLITDLEAAGDIESVQRDLRMLNDEMMT
LEQQLREHSRLEGELSTCQNDIERIEHALRDLPAAEATVAELQRQIAENDFGHEIRVAGR
QVVAELESLNYRPEDLEATRALVRSLTRWEQAERDLLLAEQRYATDLKLREQTQQLCDHA
ERERQTLHAEAEALAHQLRVLPTVQATVNQVKQQLSANEQALQAAGRDLAEKQAYYRQAE
SAAAEVESLQTQERQLSERTALFAELAEAFGKKGVQAMLIETAIPQLEDEANRLLARLTD
GQMHLRFEMQRDTKKGDTVETLEVRIADALGTRDYAAFSGGEAMRVNFAIRMALSRLLAH
RAGARLETLVIDEGFGVLDADGRERMVEAITAVQRDFARIIVITHIDDLKDRFPATLEIR
KTPLGSRWELRG
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgatccctctacaactggccctgcgcaactttatgtgctaccgcgccaccgaaaatggt
gatccgctccgcctcgacctcgacggcctgcacgtcctttgcttatcgggcgaaaatggg
gccgggaaatccaccttgctcgacgcgatcacctgggcattatggggcgaagcgcgccga
cccgacgacgatctgatcacccagggcgagacagaaatgatggtggaactggtctttgcc
ctcgacggacgcaaataccgggtgattcgccagcgtcaacgcgggcggagcagtggacgc
ggcacaggcgccggcaaaacctggcttgatctgcaacagtttgacggtaccacctggcgc
cccatcggcgaaaacaccatccgcgagacccagcgtaaaattactgaactgttgcgcatg
tcgtataccacctttgtcaacgcttccttcctgttgcagggcagagctgacgagttcacc
agcaaaaccccagccgaacgcaaagaggtactggccgaaatcctcgatctggccgaatac
gccgaactcgaacgccgtgcccgtgaacgggtgcgtctgctcgaagccgatctgattcgg
gtacgcggccagctcgaaacactccaaccaatagccaatcaggtaccattctggcagcaa
gccgtcgctgaagccgaacaacgacagcacacactccaacagcaacgcacagcgctggaa
gcagagttcacccaggcatccgaaaagctgcgtcacctggagcaagaagcgcatcggcaa
cgcgaagtccagaaccgcattgccatcctgaccggtgaaatccaacgctacagcaatgag
ctacgtgagctgaacgcacgcattgcccaggctgaacagaccatcgcccaacgtccgctc
atcgaggccggtctggccgaattgcacgcagcccgtgccgacctggaacggcttgagcag
cttcgtacccgctacgacgaactaatggcccgcaaacgcgagctacaacaggaattgaag
gctgaactcaacctgctcaacgagcggttgtcacacgccattcagcaacttgatcggctg
tacgccgaagctcaacgccttgttggattgcaacaacgggtagcagcgattcgccagcgc
ctccgcgaactggcaccggttcacgaacggctggtacagtgtcagcaccagcgcactgcg
cttgaacaacatctgaaccacattcgtgacctggtcatgcgacagcgccttctccagaat
caactcgaacaacagcggaatacgctgcaaagtgagctaaaccgttcgcatcaggaactt
gcccgcctcgaccgccagctcagcgatgttgaaacctggcgaaatgcgttgcgtgcggcc
caggatgcccaggctcgcgtccaaatccttgaagccgaacagcttaaccggcgtcaacaa
gagcaagtcgtgctggatcgcttgagtgcagcacgggcggaggctgctcaagcccgccgc
gacatcgagacattgcagaccaaccaggcattactcgccaccggcaaaggggaatgcccg
gtctgtcggcgtcacctggccgccaacgaagccgaccacgtgtacgcccattaccggcaa
gaactggaacggctgcaagcccaggagacccaggcgaaagcagcgatccaggccgccgaa
caagaactgaaacagattcgcagcaccctgaccagcacagaacaggaactcaccagactc
cgccaacaggctgcaaccattgaatccctgcaccaccagctcaatcaggctgccacctgg
caaaccgaacgtgaccaactggcgcagcgcattgccacccttaccgggcaactgaccacc
ggctccatcaatcccgcggtacaggccgaactggacaccctgatcaccgacctggaggcg
gcgggtgacattgagagtgtgcaacgcgacctccgcatgctcaacgacgagatgatgaca
cttgagcagcagttgcgcgaacacagccggctcgaaggcgaattgagtacctgccagaac
gacattgaacgcatcgagcatgcactgcgtgatcttcccgctgccgaagcgaccgtagcc
gaattgcaacgccagatcgccgaaaatgactttggccacgagattcgggttgccggacgc
caggtggttgccgaacttgaatccctcaactaccgaccggaagacctcgaagcgacacgt
gccctggtacgcagcctcacccgctgggaacaggcagaacgcgatctactcctggccgag
caacgctacgccaccgacctcaaactacgcgagcagacccaacagctctgcgatcacgcc
gaacgcgaacggcaaaccctgcacgccgaagctgaagccctggcccatcagctacgagtc
ttaccgaccgtccaggcaacggtcaatcaggtaaaacagcaactcagcgcgaacgaacag
gcacttcaggccgccggacgcgatctggccgaaaagcaagcctactacaggcaggccgaa
tcggcggcagccgaggttgagtcgcttcagacccaggagcgtcagcttagcgaacgcacc
gccctctttgccgagctggcggaagccttcggcaaaaagggcgttcaggccatgctgatc
gaaacggccattccccaactcgaagacgaagctaaccggctgctggcccgcctgaccgat
gggcagatgcatctgcgcttcgagatgcagcgtgacaccaaaaaaggggacacggtagag
acgctggaggtacggatcgccgatgccctgggcacccgtgattacgccgcgtttagcggt
ggtgaagcgatgcgggtcaattttgctattcggatggccctttcacgactactcgcccac
cgggccggtgcccggctcgaaaccctcgtgattgacgaagggtttggcgtgctcgatgcc
gatggtcgtgaacgcatggtcgaagcaattaccgctgtgcaacgcgattttgctcgcatc
atcgtgatcacgcatattgatgatttgaaggatcgcttcccggcgacgctcgaaattcgc
aaaacgccgctcggtagccgctgggaactgcgtggatag
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