Chloroflexus aurantiacus Y-400-fl: Chy400_2601
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Entry
Chy400_2601 CDS
T00859
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chl03016
]
Chy400_2601
Enzymes [BR:
chl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Chy400_2601
Transfer RNA biogenesis [BR:
chl03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Chy400_2601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACM53993
LinkDB
All DBs
Position
complement(3237526..3238926)
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AA seq
466 aa
AA seq
DB search
MQDVIFFDQRPRPDRDQTPRERRYYVWTVGCQMNISDSERLEAALQGVGYSPATRPEDAS
FIVLNSCSVRASAEERILGKLGELVRVKRQHPDTRIVLWGCMVGPNNRSIFADQLPMVDH
FVSPSAVDEVVALAPNPIYTLDEPALPVRDWSHPPVSVHVPIQYGCNMTCSYCVIPLRRG
RERSRPLAEIVEEVRRIVARGAKEITLLGQIVDSWGHDLPGRPELADLLEAVDPTPGLLR
LRFLTSHPAWMTDRLIETVARLPRCQPEINLPVQAGSDRVLKLMRRGYTVARYKTLIARI
RAAIPDISLTTDIIVGHPGETEDDFRQTMDLCAEIGFDKVHIAAFSARPGTRAAEQEQDP
ALAVPPAVKEERRRRLEQLQEQIATERMARFLGQTVEVLVEGESKGKWRGRTPGNRLVFF
SHPADLTGQLVPVKITATSPWSLQGVPQLDDSVNAQSKENGLVKAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgtgatctttttcgaccagcgcccccgtccagatcgtgatcagacgccgcgc
gagcggcgctattacgtctggactgttgggtgtcagatgaatatctcagactctgaacgg
cttgaagctgcgctgcagggtgtgggctatagcccggcaacccgtcctgaagatgccagc
tttattgtgctgaattcgtgcagtgtgcgcgcttcagccgaagagcgtatccttggtaag
ctcggtgagttggtccgggttaagcggcagcaccccgatacccggattgtactctggggt
tgtatggttggccccaataatcgctccatcttcgccgatcaattaccgatggttgatcac
tttgtttcaccttcggctgtcgatgaggtggtagccctggcgcctaaccccatctacacg
ctcgacgagccggcattgcccgtgcgtgactggagccatccgccggtatcggtgcatgtc
cccattcagtacggttgcaatatgacttgctcctactgcgtgattccgctgcgccggggt
cgtgaacgctcgcgaccactcgccgagattgtcgaagaggtgcgccgtattgtggctcgt
ggcgcgaaagaaatcacgctcctcggccagattgtcgattcctgggggcacgatttgccc
ggtcgccctgaactggctgacttgcttgaggctgttgatcccacgccgggtttgctgcgc
ctgcgcttcctgacctcacatccggcctggatgactgaccgtctgatcgagacggttgcc
cgcttgccgcgttgtcagccagagattaatctaccggtacaggctggttctgaccgggtc
ctcaagctgatgcgtcgtggctatacggttgctcgctacaagacgctgattgccaggatt
cgcgctgcgatccctgacatttcactgacgaccgacattatcgttggtcatcctggcgaa
accgaggatgatttccgtcagacgatggatctgtgtgctgaaatcggttttgataaagtc
catatcgcggccttctctgcccgtcccggtacacgggctgccgaacaggagcaagacccg
gccctcgctgtaccacctgccgtgaaagaagaacgccgccgccggctcgaacagttgcaa
gagcagattgctaccgaacgcatggctcgcttcctcggccaaacagtagaggtattggtt
gagggtgaaagcaaggggaaatggcgtggtcgtacccctggcaaccgcctggtcttcttc
agtcaccctgccgatctaaccggtcagttggtgccggtgaagatcaccgctaccagccca
tggtcgttgcagggagtgccgcaattagatgattctgttaatgctcaatccaaggagaat
ggccttgtcaaagcaagatga
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