Chloroflexus aurantiacus Y-400-fl: Chy400_3864
Help
Entry
Chy400_3864 CDS
T00859
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
chl
Chloroflexus aurantiacus Y-400-fl
Brite
KEGG Orthology (KO) [BR:
chl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Chy400_3864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chl03021
]
Chy400_3864
Transcription machinery [BR:
chl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Chy400_3864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r1_1
Sigma70_r4_2
NAT_N
Motif
Other DBs
NCBI-ProteinID:
ACM55230
LinkDB
All DBs
Position
4809911..4811107
Genome browser
AA seq
398 aa
AA seq
DB search
MTQSQPETDRAAPAINPADLQALIAQGRQQGFVTFEDIQRLVPNPDESIELIDSIYAALA
EAGVPVQEGDETALDDEPSSPATMDLDLDDELSDALLSDSVRLYLREIGQVPLLTAEQEK
RLAQLIEQGQEAERKLATLPPDSPEAARLKQLKAKGEEARQQMAAANLRLVVSIAKRYRD
RGLPLLDLIQEGSLGLLRAIEKFDYTKGYKFSTYATWWIKQALSRALADQSRLVRLPVHL
GETLNRIQSARRQLTQSLGREPTDTELANHLGMSEEKLRELRRTAQDPVSLATPVGEEAD
STLADFIPDPHALDADDAAASGMLRQQITAALDQLSERERRVLELRYGLVDGQPRTLEEV
GKAFGVTRERVRQIEVKALRKLRHPRLGKLLKDYLDQI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagagccagcccgagaccgaccgcgccgctcctgctattaatcccgcagatttg
caggcactgatcgcgcagggacggcaacaaggcttcgttacatttgaggatattcagcgg
ctggttcccaaccctgatgagtcgattgaattgatcgactccatctatgccgcattagcc
gaggccggtgttccggttcaggaaggtgatgaaacagctctggacgatgagccgtcatca
cctgccacaatggacctcgatctcgatgacgagttgtcagacgcattgctcagcgatagc
gtccgcctctatctgcgcgaaattggtcaggttcccctgctcaccgcagaacaagagaag
cgactcgcgcagttgatcgagcagggccaggaggccgagcgcaagctggcgacgctgcca
cccgatagcccggaagcagcccgcttgaaacaattgaaggcgaagggtgaagaggcgcga
cagcaaatggcagccgctaatctgcgcctcgtggttagtattgccaaacgctaccgtgac
cgtggcctgcccctcctcgatctcattcaagaaggcagcctcggattactgcgtgccatc
gaaaaatttgattacaccaaaggctacaagttcagtacatacgccacatggtggatcaag
caggcactttcccgggccctcgccgatcagtcacgcctggtacgactcccggtgcatctt
ggcgaaacccttaaccggattcagtcggcccgtcggcaactcacccaatcgctcggtcgt
gaaccaaccgatactgagctggcgaaccatcttgggatgagcgaagagaagctgcgcgag
ctgcgccgtactgcccaagacccggtatcgctggctacaccggtcggcgaagaggccgac
agtacgctggccgacttcattcccgatccgcacgcgctcgatgccgatgatgctgctgcc
agcggcatgctgcgccagcagattacggctgctctcgatcagctcagcgaacgtgagcga
cgggtgcttgagttgcgttacggcctggttgatggtcagccgcgcacgctcgaagaggtc
ggtaaagcgtttggcgttacccgcgagcgggtacggcagattgaagtcaaggcgctgcgc
aagttgcgccatccacggttgggcaagctgctgaaggattacctcgatcaaatttga
DBGET
integrated database retrieval system
