| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase subunit beta',DNA-directed RNA polymerase subunit beta',DNA-directed RNA polymerase, beta' subunit/160 kD subunit,DNA-directed RNA polymerase, beta' subunit,RNA polymerase Rpb1, domain 1
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| KO |
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| Organism |
chla Chlamydia poikilotherma
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:chla00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C834K_0710 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:chla03021]
C834K_0710 (rpoC)
03400 DNA repair and recombination proteins [BR:chla03400]
C834K_0710 (rpoC)
Enzymes [BR:chla01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C834K_0710 (rpoC)
Transcription machinery [BR:chla03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C834K_0710 (rpoC)
DNA repair and recombination proteins [BR:chla03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C834K_0710 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
I:complement(778727..782908)
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| AA seq |
1393 aa
MFGEGSRDNVALSKEGLFDKLEIGIASDITIRDKWSCGEIKKPETINYRTFKPEKGGLFC
EKIFGPTKDWECCCGKYKKIKHKGIVCDRCGVEVTLSKVRRERMAHIELAVPIVHIWFFK
TTPSRIGNVLGMTASDLERIIYYEEYVVIDPGKTDLNKKQLLNDAQYREVIEKWGKDAFV
AKMGGEAIYDLLKSEDLQSLLKELKDRLRKTKSQQARMKLAKRLKIIEGFVSSSNHPEWM
VLKSVPVVPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKAILRLKTPEVIVRNEKR
MLQEAVDALFDNGRHGHPVMGAGNRPLKSLSEMLKGKNGRFRQNLLGKRVDYSGRSVIIV
GPELKFNQCGLPKEMALELFEPFIIKRLKDQGSVYTIRSAKKMIQRGAPEVWDVLEEIIK
GHPVLLNRAPTLHRLGIQAFEPVLIEGKAIRVHPLVCAAFNADFDGDQMAVHVPLSIEAQ
LEAKVLMMAPDNIFLPSSGKPVATPSKDMTLGIYYLMADPTYFPEDHGGKIKIFRDLTEV
LRALYTGGFLDERIGNRCDETGRGIHIHEKIKVRIDGQIIETTPGRVLFNRIVPKELGFQ
NYSMPSKRISELILQCYKKVGLEATVRFLDDLKDLGFIQATKAAISMGLKDVRIPEIKSD
ILKEAYDKVAVVKKQYDDGIITDGERHSKTISIWTEVSELLSDALYVEISKQAKSKHNPL
FLMIDSGARGNKSQLKQLGALRGLMAKPNGAIIESPITSNFREGLTVLEYSISSHGARKG
LADTALKTADSGYLTRRLVDVAQDVIITEKDCGTLNHIEISAIRQGSEELLPLKDRIYGR
TVSEDIYQPGDKSKLLAKNGDVVTSAQAELIDDAGIESIKIRSTLTCESRRGVCAKCYGL
NLANGRLIGLGEAVGIIAAQSIGEPGTQLTMRTFHLGGIAATSSTPEIVTDNDGILVYMD
LRVVVGQDGNHLVLNKKGAIHIVRDEGRNLEEYKKLLSTKSIESLETYPVEVGVKILVGD
GEKISSGQRIAEVELHNIPIICDKPGFIKYEDLVEGISTEKVVNKNTGLVELIVKQHRGE
LHPQIAIYSDAGLTELVGTYAIPSGAIISVEENQQVDPGMLLARLPRGAIKTKDITGGLP
RVAELVEARKPEDAADIAKIDGVVDFKGIQKNKRILVVRDEITGMEEEHLIPLTKHLIVQ
RGDNVMKGQQLTDGLVVPHEILEICGVRELQKYLVNEVQEVYRLQGVDINDKHIEIIVRQ
MLQKVRITDPGDTTLLFGEEVNKKEFYEENRRTEEDGGKPAQAVPVLLGITKASLGTESF
ISAASFQDTTRVLTDAACSSKTDYLLGFKENVIMGHMIPGGTGFDTHKRIKQYLEKEQED
LVFDFVSESECAC |
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| NT seq |
4182 nt +upstreamnt +downstreamnt
atgttcggagaaggttctcgagacaatgtcgctctatctaaagaggggctatttgataaa
ttagaaattgggattgcctcagatattactattcgcgataagtggtcttgtggggaaatt
aagaagcctgaaacaatcaattaccgtacgtttaaacctgaaaagggtggactattttgc
gaaaagattttcggtcctacaaaggattgggaatgttgttgtggtaaatataagaagata
aaacacaaagggattgtttgtgatcgctgcggagtagaggtgactctttctaaagtgcgt
cgtgaacgtatggctcatatagagctagcagtacctattgtgcatatatggtttttcaag
actacaccttcaagaataggtaatgtcttaggaatgactgcatctgatcttgaaaggatt
atctattatgaagaatacgtagttatcgatccaggtaagacagatctaaataagaaacag
cttttaaatgacgctcaatatcgagaagtcattgagaagtggggtaaagatgcttttgta
gctaaaatgggtggagaagctatctatgatttattaaaatcagaggatcttcaaagttta
ttaaaagagcttaaggatcgtttgcgaaaaacaaaatctcagcaagctagaatgaaactt
gctaaacgattaaagattattgaaggttttgtttcctcttctaatcatcctgaatggatg
gttttaaaaagcgttcctgttgttccacctgatcttcgtccattagttcccttagatggt
ggaaggtttgctacttctgatttaaacgatttatatcgtcgtgtaatcaatcgtaacaat
cgtttgaaggctattttaagattaaaaactccggaagtgattgttcgtaatgaaaaacgt
atgctacaggaagcagtggatgcgttatttgataatggtcgtcacggacatcctgtaatg
ggagcaggaaatcgtcctttaaaatctctttctgaaatgttgaaagggaaaaatggacgc
ttccgacaaaacctcttgggtaagagagtcgactattctggacgttctgttattatcgtt
ggtcctgaattgaaatttaatcaatgcggtctgcctaaagaaatggctcttgaattgttc
gagccgtttatcattaaaagactcaaagatcaaggtagtgtctatactatccgttctgct
aagaaaatgattcaacgcggagctcctgaagtttgggatgttttagaagaaattattaaa
ggtcatcccgtattgcttaaccgagcacccactcttcaccgtttagggatacaagctttt
gaacccgtattgattgaaggtaaagcgattcgtgtccacccattagtatgcgcagctttc
aacgctgactttgacggagaccaaatggctgttcacgtgccattatctatcgaagcacag
ctagaagctaaggttttgatgatggctcctgataatatctttttaccatcttcaggaaaa
cctgttgcaacaccttctaaagacatgacattaggtatttattatctaatggctgatcct
acgtatttcccagaagatcacggagggaaaattaagatcttcagagatcttactgaagta
ttgcgagcattgtatacaggtggatttctcgatgaacgtataggtaatcgttgtgatgaa
accggacgcggtatccatattcatgaaaaaattaaagtgcgtatcgatggtcagattatt
gaaaccaccccaggaagagttctgtttaatagaattgttcccaaggaattaggatttcaa
aattatagtatgccaagtaagcgtatcagtgaattaattttacaatgttataagaaagtc
ggtcttgaagctactgtgcgttttttagatgatcttaaagatttaggatttatccaagca
acgaaagctgcgatttctatgggattaaaggatgttagaattcctgaaattaagagtgat
attcttaaagaagcttacgataaagttgcagttgttaagaagcaatatgatgatggtatt
atcacggatggggaacgtcattccaaaactattagtatttggacagaagtttccgagtta
ttgtcagacgctctttatgttgagatcagcaaacaagcgaagagtaagcacaatccttta
ttcttgatgattgactctggagctcgaggtaataagtctcagttaaaacagttaggagcc
ttacgtggtttgatggcgaagccaaacggagcaattattgaatcacctattacttcgaat
ttccgcgaaggattaacagttcttgaatactccatttcctctcacggtgctagaaaaggt
ttagccgataccgccttaaaaacagcggactccggatacttaactcgaagacttgttgac
gtagctcaagatgtgattattacagagaaagactgtggaaccttgaatcatattgaaatt
tctgcgattcgccaaggctctgaagagcttttacccttgaaagatcgtatctatggtcgt
acagtgtcggaagatatttatcagccaggagataagagcaagcttcttgctaagaacgga
gatgttgttacatctgctcaagcagagcttatcgacgatgctggtattgaaagcattaaa
attcgttccacacttacttgtgaaagccgtcgtggtgtttgcgctaaatgctatggatta
aatctcgctaatggtcgtcttattggtttaggggaagctgtaggtattattgctgcccaa
tccattggggaaccgggaacacagttgacaatgagaacgttccaccttggaggtattgct
gcgacatcctcaactccagaaattgttacagataatgacggtattttggtgtatatggat
ctacgagtggttgtaggtcaagatggaaaccatcttgtattgaacaagaagggagctatt
catattgttcgtgacgaaggacgtaatctagaagaatataagaaacttttaagtaccaaa
tctatagaaagtttagagacttatccagtagaggttggtgtgaagattttagttggcgat
ggtgagaagatatcttcgggtcaaagaatagcggaagttgaactacataatatcccaatt
atctgcgataaacctggttttataaaatatgaagacttagtagaaggtatttctacagag
aaagtcgtcaataaaaatacaggattagttgaacttattgttaaacaacatcgtggggaa
ttacatcctcaaattgctatttactctgatgctggcttaacagaattggttggaacatac
gcgattccttccggagctattatttctgtggaagaaaaccaacaagtcgatccgggtatg
ttgttagctagattacctcgtggagcaattaagactaaggatattactggtggtttacct
agggttgctgaactggttgaagctagaaagcccgaagatgccgcagatattgctaagatt
gatggtgttgtagattttaaaggaattcagaagaataaacgtattcttgttgttcgtgat
gaaatcacaggaatggaagaagaacatcttattccattgaccaaacacttgattgttcaa
cgtggagataatgtgatgaaagggcaacagcttacagatggtttggttgttcctcatgaa
atcttagaaatctgtggtgttcgtgaattacagaagtatttggtaaacgaagttcaagaa
gtttatcgtctacaaggtgtggacattaatgataaacatattgaaattattgttcgtcag
atgttacaaaaagttcggattactgatccaggcgatacaactttactctttggtgaagaa
gttaataagaaagagttttacgaagaaaatagacgtacagaagaagatggtggtaaacca
gctcaagctgttcctgtattgttaggaattaccaaagcttcgttgggtacagaatccttt
atttctgcggcatccttccaagatacgactcgggtattaactgatgctgcttgcagtagt
aaaactgactatctcttagggttcaaagaaaatgtcattatggggcatatgattcctggc
ggtactgggttcgatacgcataagcggattaaacaatacttagaaaaagaacaagaggat
cttgtttttgactttgtaagcgaatctgaatgcgcttgttag |
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