Chlamydia poikilotherma: C834K_0945
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Entry
C834K_0945 CDS
T05716
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein rapA,ATP-dependent helicase HepA,N-formylmethionyl-tRNA deformylase,DNA phosphorothioation system restriction enzyme,SNF2 family N-terminal domain
Organism
chla
Chlamydia poikilotherma
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
SNF2_assoc
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
SYX09377
UniProt:
A0A3B0Q914
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Position
I:complement(1042695..1046195)
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AA seq
1166 aa
AA seq
DB search
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQIRGLYDNVYECEIE
VDRSKSDTIDSNCDCSYNYDCQHIVALLFYLEKYFNEMVVAYSQEANLDTNQEINEEVKK
ELQETFVVAASREEERKDRAHQKEILSEYVHAANVLSANPFFLPQEYLEKNSAELAVLFV
GANDEVFRPNQHVEFQLVLRLPGRSKPFYISNIKTFLEGVLYQEPIILNGRRFFFTMQSF
NASDRKLIDLLIRYVRYANQAPEEKLLKSAYLTLTSLGVILGKMYEHQMADRGGGQAGEK
ESFSGMFCGNLEEPLCWSVSPAKMKFDLDFFDTPYKALLMTPLILVDDETLQPEQAILLE
SNVPGIIHNNVYHHFAPQIRRAHLRSFSRLRDITVPEALFGSFRENALPVFKEYAEVSNV
EVLNSFITLPYIEDVRGVCNISYLDGELEAKLHFIYDSLAIPAASFSLKYQDIRAFIRDD
GILARNLVEERKIIEEVFSGFIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPET
LSDQFIYDETVFDLSFKESSEINTYEAELKVNGLLKGISLDLLWDCISAKKRFLELPKRG
RNVKTPRRGRTSGSAKLPCILVLDLEKISPVIQIFNEIGFKVLDDFVEKCPLWSLTGISP
ELFKGLPVNFKMTDKLAEIQKQIRGEVAFDFQAIPKQIQATLRSYQTEGIHWLERLRRMH
LNGILADDMGLGKTLQAIIAITQSRLEKGKGCSLIVCPTSLVYNWKEEFRKFNPEFKTMI
VDGIPSHRRRQLATLSDYDVAITSYNLLQKDIDIYKDFVFDYVVLDEAHHIKNRTTRNAK
SVKMIRSGHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDN
MVALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTDSQKELYHSYAASAKKELSRLVK
QEGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKYDLLMDLLSSLVETGHKTVL
FSQYTKMLSIIKKDLEARGVRFVYLDGSTKNRLEIVNQFNEDPGLLVFLISLKAGGTGLN
LVGADTVIHYDMWWNPAVENQATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSL
VKKVINSDDEVVSKLTWEEVLELLQI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgctcaattttcgcaaattacgaagggattttacagctaacattttgcaggatggcaag
gaactttttgaccaaggagctgtgattaatgcgaaaatcctgtctatgaacggagaatca
gtgtgtataggagcacagattcgaggcctatatgacaacgtatatgaatgtgaaatagaa
gttgatcgatcgaaatctgataccatagattctaattgtgattgctcttataattatgat
tgccagcacatagtggcactactgttttatctagagaagtattttaatgaaatggtagtg
gcttattctcaagaagccaacttagatactaatcaagagataaatgaagaagtaaaaaaa
gagcttcaagaaacttttgttgttgcggccagtagagaagaagagagaaaagaccgagct
catcaaaaagaaattttgagtgagtacgttcacgcagcgaatgtattaagcgcgaatcca
tttttcctccctcaagaatatttagagaagaattctgcagaacttgctgttttatttgtt
ggtgccaacgatgaagtatttcgcccaaatcagcatgttgaattccaacttgttttacgt
cttcccggacgttctaaaccgttttatatttcaaatattaaaacctttcttgaaggagtt
ttatatcaagagccgattatccttaatgggcgtcgtttctttttcacaatgcaatctttc
aatgcttctgaccgtaagcttatagatttgttaattcgctatgttcgttatgcgaaccaa
gctcctgaagaaaaactattaaaatctgcttatcttacattaacatcgttaggtgtaatt
ttaggaaaaatgtatgaacatcaaatggcagatcgtggtggagggcaagctggagagaaa
gaaagtttttcaggaatgttttgtgggaaccttgaagaacctttatgttggtcggtttca
ccagctaagatgaagtttgatttagattttttcgacactccctacaaagcattgttaatg
actccactaatcttagtggacgatgagactcttcagcctgagcaagcgattcttttagaa
tctaatgttcccggaattattcataataacgtttaccatcacttcgcaccccaaattcga
cgtgcgcatttacgttctttttcaaggctacgagatattactgtcccagaagctctattc
ggctctttccgagagaatgctcttcctgtgtttaaagaatacgctgaagtttccaacgtt
gaagttctaaactcctttattactctgccttatattgaagatgttcgtggtgtctgtaac
ataagttatttagatggcgaattagaggcaaaattacattttatttatgattcgcttgcg
attccagctgcttctttttctttaaaataccaagatattcgtgcatttattcgtgacgac
ggaatcttggctagaaatcttgttgaagaacgtaaaatcatagaagaggttttctcaggc
tttatttatgatgagcgtgacggtgcttttcatgtaaaaagtgaaaagaaaatcgtagag
tttatgacagaaacaattcctaataatcagcataggataacgtttaattgtcctgagact
ctttctgatcagtttatttatgatgaaacagtctttgatctttcctttaaggaaagctct
gaaattaatacttatgaagccgagcttaaagttaatggtttgctgaagggaattagcttg
gacttgctttgggattgtataagcgctaaaaaacgtttccttgagttgccaaagcgagga
cgtaatgtaaaaactcctcgaagaggtagaacctctggttctgcaaaacttccatgtatt
ttagttttggatttagaaaaaatttctccagttattcagatttttaatgaaataggcttt
aaagttcttgatgactttgtagaaaagtgtcctttgtggagtttaacagggatttctcct
gaattattcaaaggtttaccggtcaattttaaaatgacggataaactcgcggagatacaa
aagcaaattcgtggagaagttgcttttgatttccaagctattcctaagcaaatacaagct
acattacgtagctatcaaacagaaggaattcattggctagaacgtcttagaagaatgcat
ttaaatggcattcttgctgacgatatgggccttgggaaaaccttacaagcgatcattgct
attacacaaagtagattagagaagggaaagggatgttcgctaattgtctgtccaacatct
ctagtatataactggaaagaagaattccgtaagtttaatcccgaattcaaaactatgata
gttgatgggatcccttctcatagacgtagacagctagctactttatcagattatgacgtt
gccattacctcatacaacctgttgcaaaaagacatcgatatttataaggattttgtcttt
gactatgtagttttagacgaagctcatcatattaagaaccgtacgacgcgtaatgcaaaa
tctgtaaaaatgattcgttcggggcatcgattaatcttaacagggactccgattgaaaat
tctcttgaagaattatggagccttttcgatttcttaatgcctggcttattaagcagttac
gatcgctttgttggaaaatatatccgcacaggcaactatatggggaataagaccgataat
atggttgctttgaagaagaaggtcgcaccgttcattcttcgtcgtatgaaagaagacgta
ttggaagatttacctcctgtttcagaaattctatatcattgtcaccttacagattctcag
aaagagctataccattcttatgctgcttcagctaaaaaagaactttctcgtttagttaaa
caagaaggatttgatcgtatacatatccatgttcttgcaacacttacccgtctaaaacaa
atctgttgtcacccagctatttttgcaaaagatgtacctgagccgggtgattctgcaaag
tatgatttgcttatggaccttctttcttctcttgttgagacagggcataaaaccgttctc
tttagtcaatataccaagatgttaagcatcataaaaaaagacttagaagctcgtggcgtg
cgctttgtttatttagacggttccaccaagaacagattagaaatagtcaaccagtttaac
gaagatccaggacttttagttttcttgatttctttaaaagctggaggaacaggattaaat
cttgttggtgcggacacggtgattcactacgacatgtggtggaatcctgctgtagaaaat
caagctacagatcgggtgcatcgcatagggcagaatcgctcagtgtcttcgtataagcta
gttacgttaaatactattgaggaaaaaattctaactctccaaaacaggaaaaagagcctt
gtaaagaaagtgatcaactctgatgatgaagtcgtttccaagttgacttgggaagaagta
ctagaattgctacagatatga
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