Chloracidobacterium sp. MS 40/45: J8C02_00180
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Entry
J8C02_00180 CDS
T07464
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
chlo
Chloracidobacterium sp. MS 40/45
Pathway
chlo02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
chlo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J8C02_00180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
chlo02022
]
J8C02_00180
02035 Bacterial motility proteins [BR:
chlo02035
]
J8C02_00180
Two-component system [BR:
chlo02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
J8C02_00180
Bacterial motility proteins [BR:
chlo02035
]
Pilus system
Twitching motility proteins
J8C02_00180
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA
bpMoxR
MCM
AAA_2
AAA_19
PDE8A_N
AAA_7
AAA_3
HVO_0513_N
HTH_17
nSTAND3
TIP49
Motif
Other DBs
NCBI-ProteinID:
QUV99980
LinkDB
All DBs
Position
1:47101..48543
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AA seq
480 aa
AA seq
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MPDRVPSILIVDDELSMRELLDHVFRRAGYRTFVAGNGAQALEALRGTVFDIVLSDVRMP
RLSGTELLHECRQLSPDTVVILMTAHGTVEQAREAFKLGADDFIQKPFDIDELKLIVKNA
LEKSLLRREVALLKRELGDRTRLENIIGRSRPMQEVLRLIQTIAGTNSTVLITGESGTGK
ELVARGIHACSPRSERPFVSINCGAFTETLLESELFGYMKGAFTGAITNKKGLFEAADGG
TLFLDEIGEMSLGMQVKLLRALQERSVRRVGGTEEIPVDVRVVAATNRDLSQMVESGTFR
KDLYFRVNVIPIIVPPLRERREDIRELALHFLKKYGQNRTPPVTAIAETTLKYLENYSFP
GNVRELENLIERAVALEPTHEIQPERLPETVLRYDPARTASVFELPEQGIHLENFLMEIE
KSYILQSLRRTRGNQTKAAELLHMSVRSLRHLLDKHKIRHTASMFRESGAFRTGDTSDAP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcgtgtgccgtcaattctcatcgtggatgatgagttgagtatgcgcgagctg
ctcgaccatgtgtttcggcgggccggctaccgcaccttcgtcgccggaaatggggcgcag
gccctggaggccctgcgggggaccgtgtttgacatcgtgctgtccgatgtcaggatgccg
cgtctttccggcaccgaactgctgcacgaatgccgccagctctcacccgatacggtggtc
attctcatgacggcccatggcacggtcgagcaggcgcgcgaagccttcaaactcggcgct
gatgatttcatccagaagccgttcgacattgacgaactcaagctcatcgtcaagaacgcg
ctggaaaaaagcctgctgcgccgggaagtcgccctgctcaagcgcgagttgggggaccgc
acgcggctggagaacatcattgggcgcagccgccccatgcaggaagtgttgcgactcatc
cagaccattgccggcacgaacagcacggttctcatcacgggagaatccggcaccggcaag
gaactcgtcgcccgtggcatccacgcctgcagcccgcgcagcgagcgccccttcgtttcc
atcaactgcggggcctttacggaaaccctcctcgaatcggaactctttggttacatgaag
ggtgcctttaccggcgccatcacgaacaaaaaaggacttttcgaggccgccgacggcggc
acgctgtttctcgatgaaatcggcgaaatgagcctggggatgcaggtcaagctgttgcgc
gccctccaggaacgctcggtacggcgggtgggcggcacggaggaaatcccggtggatgtg
cgcgtcgtcgccgccaccaaccgtgatctttcccagatggtcgagtccggaaccttccgc
aaagacctgtacttccgggtcaacgtcattcccatcatcgttccgccgctgcgtgagcgg
cgggaggacatccgcgagctggcgctgcacttcctcaaaaagtacgggcaaaaccgcacc
ccgccggtgacggccattgccgaaacgacgctcaagtaccttgaaaattactcgtttccg
gggaacgtccgggagctggaaaacctcatcgagcgggccgtggcgcttgagccaacccat
gaaatccagccggagcgcctgccggaaacggtgctgcgctacgacccggcgcggacggct
tccgtcttcgagctgccggaacagggcatccacctcgaaaacttcctgatggaaatcgaa
aaatcctatattttgcagtccctgcggcggacgcggggcaatcagaccaaggcggcggag
ctgcttcacatgtcggtgcgcagcctgcgccacctgctcgacaagcacaaaattcgccac
acggcgagtatgttccgtgaaagtggggcctttcgcacaggcgacacctcggatgccccg
taa
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