KEGG   Chloracidobacterium sp. MS 40/45: J8C02_00485
Entry
J8C02_00485       CDS       T07464                                 
Symbol
cas3u
Name
(GenBank) type I-U CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
chlo  Chloracidobacterium sp. MS 40/45
Brite
KEGG Orthology (KO) [BR:chlo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:chlo02048]
    J8C02_00485 (cas3u)
Enzymes [BR:chlo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     J8C02_00485 (cas3u)
Prokaryotic defense system [BR:chlo02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    J8C02_00485 (cas3u)
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C AAA_34 Dicer_platform Usp
Other DBs
NCBI-ProteinID: QUW00035
LinkDB
Position
1:120935..123904
AA seq 989 aa
MSTDKGQEWLKKALGLGDETPFPWQMELLRRFCQGEAVSSLDIPTGLGKTSVMAIWLVAR
ALKAEKLPRRLVYIVDRRAVVDQATEVAESLRKWVAGDQCVACALGLNGRPLPISTLRGQ
YVDNRAWLEDPSSPAIIVGTVDMVGSRLLFSGYGVSRRMRPYHAGLLGVDTLVVLDESHL
VPPFEHLLRAIETDSELQARDTQCQSMIPRLRLLTLSATGRTQINNTTQADATIRLTDGD
YKHPVVEKRLKARKVLRLCYLSEQTKLKDKLAEEAWKLREAWKPTEDGNKAVRILVYADS
REDAKKAREAVKKHAKGDKKQGKPEVEIETELFVGGRRVFEREEAKERLKNLGFIAGSKV
KPNFPVFLFATSAGEVGVDLDADHMVCDLVAWERMVQRLGRVNRRGDGDATVVIVIDPEP
APSESTKKAIEKRDKLNEAKRKLNELKGQKKSADNEAAEEKRKQVEKDLKQAEKDLKKCL
KEFKDADARIVARHEAAVAQYRALRKLLDAIPRKGGSMSPEALLRLRDDPDLADAFRDAM
TVAPLRPALTRALVDAWAMTSLEKHTGRPDNIQPWLRGWIENDPPQTRVVWRKYLPVRTE
GRQPSGKEIEAFFEAAPPHASEILETETYHVVKWIAARAERLLDPEKQKNTENPCKNDVV
AFALDSDGGLRKSFKLDDLKLADEKKEELTRQFAGATLVLDVRLGGLKDGLLDDEEDATP
KTADSDQGWCSKHEGSKHLVGFRVSRKEASAVVPREKDWRERFRFPAAVTEDGETTVWLI
VEKLRHDAANEEDRSVGNQQLLNKHERWTAKRAFHIAKALNLAPEQRRLLIIAARFHDEG
KRAAKWQQAFHAPGDGVYAKTEGPINYQLLDGYRHELGSLLRIGNNKQIQKLFQKLSEED
RDLVLHLITAHHGFARPVIGIRSCEDAPPSALEEKAAEIALRFARLQARWGPWGLAWWEA
LLRAADQQASRDNDQASRDNDARVAQGDA
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgagcacagacaaaggccaggaatggctcaaaaaagcgcttggtctgggagatgaaacc
ccgttcccatggcagatggagctgcttcgacgcttctgccaaggtgaagccgtttcttcg
cttgacatcccgacaggacttggcaagacctcggttatggccatctggcttgtcgcgcga
gcgctgaaagccgaaaaacttccccgaaggctcgtctatatcgttgaccggcgcgcagtt
gtggatcaagcaaccgaggttgctgaatcgcttcgcaagtgggtagctggagatcaatgt
gttgcctgtgcacttggcctcaatggtcgcccgctgcccatctcaacgctgcgtggacag
tacgttgacaaccgcgcatggcttgaagacccatcttcgcctgcaattattgttggcacg
gtggacatggtgggctcacggcttctcttctcggggtatggggtttcccgacggatgcgc
ccctaccacgccggcctccttggtgtggatacgctggttgtccttgatgagtcccacttg
gtcccgccctttgaacatcttctgcgagccatcgagacggattctgagcttcaagcccgt
gacacgcagtgtcagagcatgattccgcggcttcgtttgctcactctctcagccacaggc
cgcacgcaaatcaacaatacgacgcaagctgatgccacgattcggctgacagacggggat
tataaacacccggttgtagaaaaaaggttgaaggcaagaaaggtactgcggttgtgctat
ctcagtgagcagaccaaactgaaagacaagctggcggaagaggcttggaagcttagggag
gcttggaagcctacggaagatggcaataaggctgtgcgcattctcgtgtatgccgatagc
cgggaggatgccaagaaagccagagaggctgtcaaaaagcacgcgaagggtgacaagaag
cagggtaagcctgaagtggagatcgagaccgagcttttcgtgggtggccgccgcgtgttt
gaacgtgaggaagcaaaggaacggttgaagaaccttggtttcatcgccggaagcaaagtg
aagcctaatttcccagtgtttctgttcgccacgtcagcaggtgaagtcggtgttgacctc
gatgccgaccacatggtgtgcgatctcgttgcgtgggagcggatggtccagcggctcggc
cgcgtgaatcggcgcggtgatggagatgcgacggtcgtcatcgtgatcgaccctgagccc
gcgccctctgaaagcacgaaaaaagccattgaaaagagggataaactcaatgaggcaaag
agaaagctcaatgagctgaaaggtcagaagaaatctgccgacaacgaagctgctgaggag
aagcgcaagcaagttgagaaggacctcaagcaagctgagaaggacctgaagaagtgcctc
aaggagttcaaggacgccgacgccaggatcgtggcacgccatgaagctgcggttgcgcaa
tatcgtgccctgcggaaattgctcgatgccatcccaaggaaaggcggttcaatgagtccc
gaagctctgctgaggctgcgagatgacccagatctcgccgatgccttccgcgacgcgatg
actgtcgcgccgcttcgtcctgcactgacgcgggcactcgttgatgcctgggcgatgacg
tcgctcgaaaagcacaccgggcgtcccgacaacattcaaccgtggctgcggggctggatc
gagaatgatccgccgcagacgagggtggtctggcggaagtatctgcccgttcgcacggag
gggagacagcccagcgggaaggagatcgaagccttcttcgaggctgcaccgccgcacgca
agcgaaatccttgagacggagacataccacgtcgtcaagtggattgccgctcgtgctgag
cgtttgcttgatccggagaagcagaagaacactgagaatccttgtaagaatgacgttgtg
gccttcgcccttgattctgacggtgggctgcggaaatccttcaagcttgacgatctcaaa
ctcgcagatgagaaaaaagaagagcttaccaggcagtttgccggtgccacgctggtcctt
gacgtccgcttgggtggactgaaagatggcttactcgacgacgaggaagacgccaccccc
aagacggccgacagcgaccaaggatggtgcagcaagcacgagggcagcaagcacttggtc
ggattccgtgtgtcgaggaaggaggcatccgcggtcgtaccgcgtgagaaggactggcgc
gagcggttccgcttcccggcggccgtgacggaggatggtgagacgaccgtgtggctcatc
gtggagaagttgcgacacgacgcggcgaatgaggaggaccgctcagtggggaatcagcaa
ctcctgaacaaacacgagcgctggacggcaaaacgtgcatttcacattgcaaaggccctg
aatcttgctccagaacagcggcgattacttattattgctgcacgttttcacgatgagggt
aagcgtgcggcaaagtggcagcaggcgttccatgcaccgggggatggcgtgtacgccaag
accgaagggcctatcaattaccaactgcttgacggttaccggcacgagctgggatcgctt
cttcggattgggaacaataagcagattcaaaaactcttccaaaaactctcggaggaagac
cgcgacctcgtgctccatctgatcacggcacaccatgggttcgcccgaccggtcatcggc
atcagaagctgcgaggacgcaccgccttctgcccttgaggagaaagctgccgagattgcc
ctccgcttcgcgcgcctgcaagcccgttggggtccgtgggggctcgcctggtgggaggcg
ctgttgcgcgcggccgaccaacaagcgtcacgtgacaacgaccaagcgtcacgtgacaac
gacgcacgggttgctcaaggagatgcgtga

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