Chloracidobacterium sp. MS 40/45: J8C02_00975
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Entry
J8C02_00975 CDS
T07464
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
chlo
Chloracidobacterium sp. MS 40/45
Pathway
chlo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chlo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J8C02_00975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chlo03021
]
J8C02_00975
Transcription machinery [BR:
chlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J8C02_00975
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
QUW00127
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All DBs
Position
1:239154..240791
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AA seq
545 aa
AA seq
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MTGETTQSLVKQVMTAARGRAFLSYDELNALLPPGMTDVAVIEALLSALERRGIRVGEQH
ERPLPAGAVPLAGAVPPAGAVPPAGAVHGTAPTAPASPTAFFEDPLRPYLQEMGRIATLS
AEDEAALVAGIRCTEVRFRKRLSRLPATAVLLVEKAEAMARGESAAARWFDLSGTAAGPE
PGETASSEATSLEAALDEAVARVRQALEAVQDEWSLLSAVADLPASADWQRRRLARARIV
LSRAVLDVPLSRTGYTSLLEALEAGRRTNAAWLLTAAEPEGIARTLAQARQMFDRAAAAR
QRLVETNLRLVVSVAKQYTRRGLGLTDLIQEGNLGLLRAAERFSGQRAERFASYATWWIR
RAMAQALSEQPRLIRLPAAVRAELTRLLEAMHRLTLERRREPKQAELAEHLGMSLEKVQM
LLQLAQPPVSLETPVGDEEDQSLGDFIADTHAPNPLDDAARVRLRGDLDAALQSLNAREE
KVLRMRFGLGADGKAYTLEEVAQFFALPRERIQRIEAEALRKLRRPARSQRLRQFLDDTA
HDASA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtgagacgacccagtcgcttgtcaagcaagtgatgactgccgcgcgtggccgg
gcttttctgtcctatgacgaactcaatgccctgctgccgccggggatgaccgatgtcgcg
gtcatcgaggcgctgctgtccgcgctggagcggcgtggcattcgcgtgggagagcaacat
gaacgcccgttgccagcaggggcggttccactggcgggggcggttccgccggcaggggcg
gttccgccggcaggggcggttcacggaaccgcccctacagcgccggcgtcgccgaccgcc
ttttttgaagacccgctgcgcccgtaccttcaggaaatgggacggattgccacgttgtcc
gccgaagatgaagccgcgctggtggccggcatccgttgcaccgaagtacggtttcggaag
cggctttcccgcctgccggccacggcggtcctgctcgttgaaaaggcagaagccatggcg
cggggagagagtgcggcagcccgctggtttgatctgtcgggaacggcagccgggccggag
ccgggcgaaacagcatcgtcggaagccacgtctctggaggccgcccttgacgaggctgtg
gcgcgtgtacggcaggcgctggaagccgttcaggatgagtggtctctgttgtccgccgtg
gctgatctgccggcatcggcggactggcagcgccgccgcctggcccgggcgcggattgtc
ctgtcgcgggccgtgctggatgtgccgctttcccgtaccggttacacgtccctgcttgaa
gccctggaggctggacggcgtaccaacgccgcgtggctgctgacggccgccgagccggag
ggcatcgcgcgcaccctggcgcaggcgcggcagatgtttgaccgggcggcggcggcgcgg
cagcggctggtggaaaccaatctgcggctggtggtgtcggttgccaaacaatatacccgc
cgggggctgggactgacggacctgattcaggaaggcaatctcggactgctgcgcgccgcc
gagcggttcagcgggcaacgcgccgaacggtttgcttcctacgcgacgtggtggattcgc
cgcgccatggcgcaggcgctcagtgagcagccgcgcctgattcggttgccggcggccgtg
cgcgccgaactcacgcggctgctcgaagccatgcaccgtctgacgctggaacggcgccgt
gagccaaaacaggccgaactggcggaacatctgggcatgtcgcttgaaaaagtgcagatg
ttgctccagttggcgcagccgccggtcagcctcgaaacaccggtgggcgatgaagaagac
cagagtctgggggacttcattgccgatacccacgcgccgaatccgctggatgatgcggcg
cgtgtccgtctgcggggagacctggatgccgcgcttcagtcgctcaatgcccgcgaggaa
aaggtgctgcggatgcgctttgggttgggcgcggatggcaaagcctacacgctcgaagaa
gtcgcgcagttttttgcgctcccacgggagcgcatccagcgcattgaggcggaggccctg
cggaagctgcggcgtccggcgcgcagccagcgcctgcgccagtttctggacgatacggcg
cacgatgcgtcggcctga
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