Chloracidobacterium sp. MS 40/45: J8C02_02745
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Entry
J8C02_02745 CDS
T07464
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
chlo
Chloracidobacterium sp. MS 40/45
Pathway
chlo03410
Base excision repair
chlo03430
Mismatch repair
chlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J8C02_02745 (recJ)
03430 Mismatch repair
J8C02_02745 (recJ)
03440 Homologous recombination
J8C02_02745 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chlo03400
]
J8C02_02745 (recJ)
DNA repair and recombination proteins [BR:
chlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
J8C02_02745 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J8C02_02745 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
J8C02_02745 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF3239
Urocanase_N
Motif
Other DBs
NCBI-ProteinID:
QUW00436
LinkDB
All DBs
Position
1:complement(646112..647797)
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AA seq
561 aa
AA seq
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MKRLTQALDIHPLVATCLINRGLTTPEQAAAFLTPDLTHVPDPRPMRNLTEALHIIGRAV
ERRERIRIVGDYDCDGTTGLVTLRNVLRQLGVQTDDFVSYYVPDREQEGYGLNPGIIGQA
AADGVQVLVSVDIGITAHREWEMARAQGIVGVCIDHHTALGSRVPADAVVVCPKQVGDAY
PEKDLAACGLAWQMARALLGERPNGEAFLRSLTKLVAIGTYADLVPLSSPANRAIVAEGL
RGLNSGSKNPGLSALLEVAGLRERPIGAGDLGFRLGPRINAAGRIEGTTVGIIQLFDSLT
PDEARQRAQQIDAWNTERQAIQRQLVDQLEARIASQPQDDPVYVLAGNHTDGWHQGVVGI
AASKVVESHHHPALVCSIRDGIAHGSGRSIPQFNLIEALQTIGQDGLFLRYGGHPAAAGF
CLPVERLPELRQRINAYARQVLPPDALTRVYVSDGDLPLGELTLPLVESLAKLEPHGIGN
PYPRFILRGHILEQRILKDQHLKLILGDGPHRAEVLWWQRREYAGQLPQQTKVEVLGRPD
INVWQGRTSLQFIATDIRLAT
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgcctgacgcaggcgctggacattcacccgctcgtcgccacctgcctcatcaac
cggggactgacgacaccggaacaggcggccgcctttctcacaccggatttgacccacgtg
cccgacccgcgcccgatgcgcaacctcacagaagccctgcatatcatcgggcgggccgtg
gagcgccgggagcgcatccgcatcgtcggagactacgactgcgacggcacgaccgggctg
gtcacgctccgcaatgtgctgcggcaactcggcgtccagacggacgacttcgtttcctac
tacgttcccgaccgggaacaggaaggttacggactcaatcccggcatcatcgggcaggcg
gccgccgatggcgttcaggtgctcgtgtcggtggacatcggcatcaccgcccaccgcgaa
tgggaaatggcgcgggcgcagggcatcgtcggcgtgtgcattgaccaccatacggcgctg
ggcagccgggttccggcggatgccgtcgtggtctgcccgaaacaggtcggcgacgcctac
ccggagaaagacctcgccgcctgtgggctggcctggcagatggcccgcgccctgctcggc
gaacgccccaatggggaggcatttctccgctccctgaccaagctcgtcgccatcggcacg
tatgccgatctcgttcccctctccagcccggccaaccgggccatcgtggcggaagggctg
cgcggtctcaacagcggctcgaaaaatcccggtctgtccgcgctccttgaagtggcggga
ctcagggaacgtcccatcggggccggcgaccttggcttccgcctcgggccgcgtatcaat
gccgccgggcggattgaaggcaccaccgtgggcatcatccagttgttcgacagcctcaca
ccggatgaggcccggcagcgggcgcaacagattgacgcctggaataccgaacgccaggcc
attcaacggcaattggtggaccagctcgaagcccggattgccagccaaccgcaggatgat
ccggtttatgtcctggccggcaaccataccgacggctggcatcagggcgtggtcgggatt
gcggcctcgaaggtcgtggaaagccatcaccacccggcgctggtctgtagcattcgggac
ggtatcgcccatggctccgggcgcagcatcccccagttcaatctcatcgaggcgcttcag
accattggccaggatgggcttttcctgcgctatgggggacacccggccgcggccggtttc
tgccttccggttgaacgtctgccggagctgcgccagcgcatcaatgcttatgcccggcag
gtgctgccgcccgacgcgctgacccgcgtgtatgtctcggacggcgatctgccgctgggc
gagctgaccctgcccctggtcgaaagcctcgccaaactcgaaccccacggcatcggcaac
ccctacccacggttcatcctgcgcggtcacatcctggaacagcgcatcctcaaggaccag
cacctcaagctcatccttggcgacgggccacaccgggccgaagtgctgtggtggcagcgg
cgggaatatgccgggcaactgccccagcagacgaaggtcgaagtgctcggccgaccggac
atcaacgtgtggcagggcagaaccagccttcagttcatcgccaccgacatccggctggca
acctga
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integrated database retrieval system
