Chloracidobacterium sp. MS 40/45: J8C02_06725
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Entry
J8C02_06725 CDS
T07464
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chlo
Chloracidobacterium sp. MS 40/45
Pathway
chlo03420
Nucleotide excision repair
chlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J8C02_06725
03430 Mismatch repair
J8C02_06725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chlo03400
]
J8C02_06725
Enzymes [BR:
chlo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J8C02_06725
DNA repair and recombination proteins [BR:
chlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J8C02_06725
MMR (mismatch excision repair)
Other MMR factors
J8C02_06725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_11
ResIII
Tudor_1_RapA
Motif
Other DBs
NCBI-ProteinID:
QUV99128
LinkDB
All DBs
Position
1:complement(1632079..1634304)
Genome browser
AA seq
741 aa
AA seq
DB search
MNALLDGLNPEQRAAVTTTDGPLLVIAGAGSGKTRVIVHRMAYLLDQGLARPEQILAVTF
TNKAALEMKTRVHQLLPPSRRYGELLVATFHSFCVRVLRRHLDRFGGSYTRDFTIYDTDD
QGRLVKACLKELQIDEKQFPPRMIQYAISRAKNQGETPETMAPASDPKRDAIIRTFRLYE
TRLAAANALDFDDLLLLTVQLLRRFPDVADAYQDRFRYILIDEYQDTNPPQFNLVRLLTQ
RHQNLCVVGDPDQSIYRFRAADIRNILEFERHYPRAKTIVLAQNYRSTKVILQAANAVIR
HNRARREKQLTTQNAVGEPIRGLLAPTAEAEADLVVEALLRWQRQRAHLPEAETRAAILY
RTNAQSRLFEEACRRRGVPYVLVGGFSFYQRAEIKDALAYLRLLLNPHDDAAFERIVNVP
ARGIGKATLEIIAARAAREGLSRWTAMEQVVAEGALTPRAATALAGFAGLIRDLQTRLEG
SRLAALVSAVVTRSGYLEMLAQEGTLEAESRRQNLEELVTAAAEADERGASLREFLDQAA
LVADTDDLVDNARVTLMTIHSAKGLEFPLVFVVGLEEGLFPHARVVDDGEELEEERRLFY
VAITRARHQLYLTQAQRRRVYGEERLTDPSRFLEEVPEPIVQFDGALPSSGSVTRSSLSY
GASYGAPAGPSVAKTSVEPPRSQPVAGAAEGFRLGDRVEHATYGAGQVVRVADGKLDIAF
PGKGIKRFVAAAAPLTRLPRR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctttgcttgacggactcaatcccgaacaacgcgccgccgtcaccacgacggac
ggccccctgctggtcattgccggcgccggttccgggaaaacccgggtcatcgttcaccgc
atggcctacctgctcgatcaggggctggcgcggcccgaacagattctggccgtgaccttc
accaacaaggccgcgctcgaaatgaaaacgcgcgtccaccagcttctgccgccttcccgc
cggtatggagaactgctcgtggcgacgttccacagcttttgcgtccgggtcctgcggcgt
cacctcgaccgctttggcgggagctacacccgcgatttcaccatttacgacaccgacgac
caggggcgactcgtcaaagcctgtctgaaggaactccagattgatgaaaaacagtttccg
ccacggatgattcagtacgccatcagccgcgccaagaatcagggggagacgccggaaacc
atggccccggcatccgatccgaagcgggacgccatcatcagaaccttccggctgtatgaa
acgcgcctggcggcggccaatgcgctcgactttgacgacctgttgctgctgaccgtacag
ctcctgcggcggtttccagacgtggcggatgcctatcaggaccgtttccgctacatcctc
attgatgagtaccaggacacgaatcccccgcagttcaacctggtgcggctgctgacgcag
cgccatcagaacctctgtgtcgttggcgatcccgaccagtccatttaccggtttcgggcg
gcggacattcgcaacattctggagttcgagcgccactacccacgggccaaaaccatcgtt
ctggcgcagaactaccgttcgacgaaagtcattctccaggccgccaatgccgtcatccgg
cacaaccgcgcccgccgggaaaaacagcttacgacgcaaaatgccgtcggggagccaatt
cgtggtctcctcgccccgacggccgaggccgaagccgacctcgtcgtggaggcgttgctg
cggtggcagcgtcagcgggcgcacctgccggaagccgagacccgcgcggccatcctgtac
cggacgaatgcccagtcccggttgtttgaggaagcctgccggcggcgtggtgtgccctac
gttctggtgggcgggttttctttttaccagcgggctgaaatcaaggatgctctggcctac
ctgcggctgctgctcaatccgcatgacgacgccgctttcgagcgcatcgtcaatgtgccg
gcgcggggcatcgggaaggccaccctggaaatcattgccgcgcgggccgcgcgcgagggg
ctttcgcgctggaccgccatggagcaggtggtggcggaaggcgcgctgactccacgcgca
gcgacggcgctggccggttttgccggtctgattcgtgacctgcaaacccggttggaaggt
tcccggctggcggccctggtgtcggccgtcgtcacccgctccggctacctggagatgctg
gcccaggaaggcacgctcgaagccgaaagtcgccggcagaacctcgaagaactcgtcacg
gcggcggccgaagccgacgaacggggggcttcgctgcgggagttccttgatcaggccgcg
ctggtggccgacaccgatgacctcgtggacaacgcccgcgtcacgctcatgacgattcac
agcgccaaggggcttgagttcccgttggtctttgtcgtcggtctggaagaagggctgttt
ccgcatgcgcgcgtcgtggacgacggggaggaactcgaagaggaacggcggctcttttac
gtcgccatcacccgcgccaggcatcagctctatctgacgcaggcgcagcgccgccgggtg
tatggcgaagaacggctcaccgatccctcccgctttctggaagaggtcccggaacctatc
gtgcagttcgacggtgcgctgccttcatccggcagcgtcacccggtcgtccctgtcgtat
ggtgcgtcgtatggcgcaccggccggaccatcggttgccaaaacgtccgtggagccgccg
cgaagtcagccggtggccggcgcggcggagggattccggctgggcgaccgggtcgaacac
gcaacctatggcgcggggcaggtcgtccgggtggccgacggcaagctcgacatcgctttt
ccgggcaaaggcatcaagcggtttgtggcggcggccgcccccctgacccggctgccccgg
cgctga
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