Chloracidobacterium sp. MS 40/45: J8C02_10175
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Entry
J8C02_10175 CDS
T07464
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
chlo
Chloracidobacterium sp. MS 40/45
Pathway
chlo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J8C02_10175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chlo03400
]
J8C02_10175
Enzymes [BR:
chlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J8C02_10175
DNA repair and recombination proteins [BR:
chlo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J8C02_10175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
AAA_22
T2SSE
HHH
UvrD-helicase
ABC_tran
Rad17
nSTAND3
Helicase_RecD
HHH_2
AAA_28
ATPase_2
NPHP3_N
HHH_3
AAA
PIF1
UvrD_C
AAA_16
MeaB
SLFN-g3_helicase
NACHT
Motif
Other DBs
NCBI-ProteinID:
QUW01069
LinkDB
All DBs
Position
1:complement(2429935..2432136)
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AA seq
733 aa
AA seq
DB search
MNNSRPPSALVGAVERVTYANPETGYTVLRLRVNGEREAVTVVGYFPALSPGATLRLSGF
WTTHPTHGPQFKATQHEVSQPATLAGIEKYLGSGLIRGIGPVTARRIVAHFREATLHVIE
TDIHRLSEVPGIGRKRVELIAQAWEAQRAIKDVMLFLQSHGVSTHYAARIYRQYGARAIQ
TVIENPYQLARDIYGVGFKTADGIAANLGIAPDAEMRLRAACLHVLQEAADQGHCFLPES
RLLASLQTLLGVPDAERLHTVLATLTAEAELVARPPAPPAAPETSYHLPYLFYAEQHIAR
LLRGLTLRPMTELEAQALRWLDAYAANESLQLSPEQRQAVLTAATQRVLVVTGGPGCGKT
TTLRAIVGLFRWLGIRVELTTPTGRAAQRLSEVTGGEARTLHRLLAYDPARGRFTHDSDY
PLDTDAVIVDEASMLDAPLAAALLKAMPARGRLLLVGDVDQLPSVGPGRVLGDIIAAGVV
PVCRLTQVFRQAEGSAIIQNAHRIRAGQFPQLIRPDGRTTTDCYFVAADTPADIQARLEH
VVASLSRRFGYDPVNDIQVLTPMNRGEIGALELNRRLQHALNPLRPGQPEIERLGRRFRV
GDKVVQRVNNYTREVFNGDIGRIVDIQLEDQTMTVDYDGRCVTYDWADVNELSHGFALSV
HKSQGSEYPAVVIVLHTQAFPVLSRNLLYTALTRAKRTAVLLGTTRAIGLSVRQVEAARR
YTWLVEALREPIR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaataactcccggccgccttcggctctcgttggcgccgtcgagcgtgtgacctacgcc
aacccggaaacgggctacacggtgctgcgcctccgggtgaacggtgagcgcgaggccgtg
acggtggtcgggtacttcccggcgctgtcgccgggggcgacgctccgcttgtccgggttc
tggacgacccatcccacgcacggcccgcaattcaaggccacccagcatgaagtctcccaa
ccggcaacgctggccggcatcgagaaatacctgggttccggtctcatcagagggattggg
cccgtcacggcccggcggatcgtcgcccacttccgggaagccaccttgcatgtcatcgag
accgacatccaccgcctgagcgaagtgcccggcatcggccgcaagcgcgtcgagctgatt
gcacaggcctgggaggcacagcgcgccatcaaggatgtcatgctgtttctgcaatcgcat
ggcgtctcgacccactatgccgccaggatatacaggcagtatggtgcccgcgcgattcag
accgtcatcgaaaatccctaccagcttgcgcgggacatctacggggtgggtttcaaaacg
gccgacgggattgcggccaatctcggcatagcgcctgatgcggaaatgcgtctgcgggca
gcctgcctccacgtgctccaggaagccgccgaccagggacactgctttctgccggagagc
cggcttctcgcgtccctgcaaacgcttctgggggtgcctgacgccgagcgcctgcacact
gtcctggcaactctgacggccgaggccgaactggtggcccgtccgccggcgccgcccgct
gcgccggaaacgagttaccacctgccgtacctgttttatgccgagcagcatattgcacgg
ctgctgcgtggtctcaccttacgtcccatgaccgaactggaagcgcaggcgctgcgctgg
ctggacgcctacgcggcaaacgagtcgcttcaattgtcgccggagcagcggcaggccgta
ctgacggccgcaacgcagcgcgtgctggtggtcacgggcggccccggctgcggcaagaca
acaacgttgcgcgccattgttggtctgttccgctggcttgggatacgggtcgaactgacg
acaccgaccggacgtgccgcccagcggctttccgaagtgaccggcggcgaggcgcgtacg
ctgcatcggctgctggcctatgacccggcccgtgggcgctttacccatgacagcgattac
ccgctcgacacggatgccgtcatcgtggatgaagcctcgatgctcgatgctccgctggcc
gcggcgctgctcaaggccatgccggcgcggggacggctgctgctcgtgggggatgttgac
cagttgccttccgtcgggccgggccgggtgcttggtgacatcattgccgccggggtcgtg
ccggtctgccgtctgacccaggtgtttcgccaggccgagggcagcgccatcatccagaat
gcccaccggattcgggccggccagtttccccagctcatccggccggatggcaggacgacc
accgactgctacttcgtggcggccgacaccccggccgacatccaggcgcgactggaacat
gtcgtggcgagcctgtcccggcgttttgggtacgacccggtgaacgacatccaggtgctg
accccgatgaaccggggggaaatcggcgcccttgagctcaaccggcgcttacagcatgcg
ctcaatccgctgcgtccggggcagcctgagatcgagcgtctggggcgccgcttccgggtc
ggggacaaggtcgtgcagcgcgtcaacaactacacccgcgaagtcttcaacggcgacatc
gggcgcatcgtggacatccagcttgaggaccagaccatgaccgtggattacgatgggcgg
tgcgtcacctatgactgggcggatgtcaacgaactcagccacggctttgccctttccgtc
cacaaaagccaggggtcggagtatccggccgtggtgattgtcctgcacacccaggcattc
ccggtgctcagccgcaacctgctctacacggcgctgacgcgcgccaaacggacggcagtg
ctgctgggaacgacccgggccatcggcctttccgtgcggcaggtggaagccgcccggcgc
tacacctggctggtggaggcgctgcgtgaacccatccggtag
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