Corynebacterium humireducens: B842_00605
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Entry
B842_00605 CDS
T03576
Name
(GenBank) ATP-dependent helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
chm
Corynebacterium humireducens
Brite
KEGG Orthology (KO) [BR:
chm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chm03019
]
B842_00605
Enzymes [BR:
chm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B842_00605
Messenger RNA biogenesis [BR:
chm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B842_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_N
AAA_11
AAA_30
ParA
Helicase_RecD
AAA_19
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJE31977
UniProt:
A0A0B5D4S8
LinkDB
All DBs
Position
complement(129267..131597)
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AA seq
776 aa
AA seq
DB search
MGTMLFDLERIGEGLPVAGTIGRLPELLERTLVVQAPPGTGKTTLVPPALANHTGGKVLV
TAPRRVAVRAAARRLAHLDGSRIGERVGFTVRGEHHPGSHVEFMTPGVLLRRLMSEPELA
GVAAVAVDEVHERQLDTDLVLGMLLELTELRDDLSVVAMSATLDVDRFATLMDAPVLDTP
AVTHPLTVEYAPHPGRAGNTHEFLDHLADLAQGHDDAVLVFVPGVREVEYVCSRIPGAVP
LHGSLDAREQDAALGGGARVIVATSIAESSLTVPGVRVVVDSGLSRVPRRDATRDMTGLI
TVSAAQSTVDQRAGRAGREGPGRVLRAYSQADYQQFRPHITPEIATSDLTQAALTMAVWG
TPRGTGLPLPDAPPSPALDSAETVLRGIGAVTATGEATDLGRQLAALPVDPRLGRALVEC
GPAAARTVAVLADSPRGDVARAPAPAREVRRLERLVRGGTGESDPGVITALAFPGRVARR
VGEEYLLVSGTRAVLPGDLGLTGAEWLAVAEVTRSGGTSREGRAGATIRAAARLTEEQAR
EVVGVTSQVVATVEGGRVRGRQVRSLGAIELSSTPVQVPPEEAAAALAATVAREGPDMFH
FSAAAQGLRDRLAYLHQQLGEPWPDVDAADPETWLGPELAEVARGASISRVDMYPALQRL
LPWPEATRLEELAPERLLVPSGSRHRVDYATGRPVVSVKLQECFGLDASPELAGKPVLFH
LLSPAGRPLAVTDDLASFWSGPYAQVRAEMRGRYPKHPWPEDPWTAPATARTKKRM
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccatgctatttgacctggaacgcattggggagggcctgcccgtcgccggcacg
atcgggcggctgccggagcttctggagcggacgctggtggtgcaagcgccgcccggcacg
ggcaagaccaccctcgtgcccccggcgctggccaaccacaccggcggaaaggtgctggtc
acggccccgcggagggtggcggtgcgggcggccgcgcgcaggctggcccacctcgacggc
tcccgtatcggcgagcgcgtggggttcacggtgcgtggtgagcaccacccgggcagccac
gtggagttcatgacgccgggcgtgctgctgcgtcgcctcatgtccgagccggagctcgcg
ggggtggcggcggtggcggtcgatgaggtgcacgagcggcagctggacaccgacctggtg
ctgggcatgctgctggagctcaccgagctgcgcgatgacctcagcgtggtggcgatgtcc
gcgaccctggacgtggacaggttcgccaccctcatggacgcccccgtcctggacaccccg
gccgtcacgcacccgctgaccgtcgagtacgcgccgcatccggggcgcgcgggcaacacc
cacgagttcctcgaccacctggccgacctggcgcagggtcacgacgacgccgtgctggtc
ttcgtcccgggcgtgcgcgaggtcgagtacgtgtgctcgcggatccccggcgccgtcccg
ctgcacggctccctggacgcccgtgagcaggacgcggcgctcggtggcggggcgcgggtg
atcgtcgcgacgtcgatcgccgagtcctcgctcaccgtgcccggcgtgcgcgtcgtggtg
gactccggcctctcgcgcgtgccacgccgcgacgccacccgcgacatgaccggcctgatc
accgtctctgcggcgcagtccaccgtggaccagcgtgccggccgcgccgggcgtgagggc
ccgggacgggtgctgcgcgcctactcgcaggccgactaccagcagtttcgcccgcacatc
accccggagatcgccaccagcgacctcacgcaggcggcgctgacgatggcggtgtggggc
acgccccgcggcaccggcctcccgcttcccgacgccccaccctcccccgccctcgactcc
gccgagacggtgctgcgcggcatcggggcggtgacggccacgggcgaggcgacggacctg
ggccggcagctggccgctctgccggtggacccgcggctggggcgcgccctggtggagtgc
ggaccagccgccgcccggaccgtggcggtgctggccgattcaccccgcggtgacgtcgcc
cgggcaccggccccggcgcgggaggtgcgccgcctggagcggctggtgcgcggcggcacc
ggggagtccgacccgggcgtgatcacggcgctggcgttcccggggcgcgtggcccggcgc
gtcggcgaggagtacctgctggtcagcggcacccgggccgtcctgcccggcgacctggga
ctcaccggcgccgagtggctggccgtcgccgaggtaacccgcagcggcggcacctcccgc
gagggccgggccggggcgaccatccgcgcggccgcccgcctgacggaggagcaggcacgg
gaggtcgtcggggtgacctcccaggtggtggccaccgtcgagggcggccgcgtacggggc
cggcaggtgcgcagcctcggcgccatcgagctgagctccacccccgtgcaggtgccgccg
gaggaggccgccgcggcgctggccgccaccgtggcccgggagggaccggacatgttccac
ttctccgccgccgcccagggactccgtgacaggctcgcctacctgcaccagcagctcggg
gaaccgtggcccgacgtcgatgccgccgacccggagacctggctcgggccggaactggcg
gaggtggcgcggggggcgtcgataagcagggtggacatgtaccccgcactgcagcgcctc
ctgccgtggccggaggccacgcgcctggaggagctggcgccggagcgtctcctggtgccc
agcggaagccggcaccgcgtggactacgcgacgggccgccccgtggtgagcgtcaaactg
caggagtgcttcggcctggacgcctccccggaactggcggggaagccggtgctcttccac
ctgctctcccccgccgggcggccgctcgccgtcaccgacgacctggccagcttctggtcc
gggccctacgcgcaggtccgcgccgagatgcgcggccgctacccgaagcacccctggccc
gaggacccgtggaccgccccggcgacagcccggacgaagaagcggatgtag
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