Corynebacterium humireducens: B842_01130
Help
Entry
B842_01130 CDS
T03576
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chm
Corynebacterium humireducens
Brite
KEGG Orthology (KO) [BR:
chm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chm03032
]
B842_01130
03400 DNA repair and recombination proteins [BR:
chm03400
]
B842_01130
Enzymes [BR:
chm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B842_01130
DNA replication proteins [BR:
chm03032
]
Prokaryotic type
DNA Topoisomerases
B842_01130
DNA repair and recombination proteins [BR:
chm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B842_01130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AJE32082
UniProt:
A0A0B5D4Y3
LinkDB
All DBs
Position
234592..237561
Genome browser
AA seq
989 aa
AA seq
DB search
MAEAKGPGKTLVIVESSTKAKKIQPYLGDGYIVEASVGHIRDLPRGAADVPAKYKKEPWA
RLGVDTENGFAPLYVVSPDKKKKVADLRAKLKLCDELLLATDPDREGEAIAWHLLEVLKP
TVPVRRMVFNEITKPAILAAAENTRDLDENLVDAQETRRILDRLYGYEVSPVLWKKVMPR
LSAGRVQSVATRVIVERERERMAFISAEYWDLSVDLDTGATRAAADPDNPTSFQAKLATL
DGRRVAQGRDFDDRGRLKGEAVVVGRQQAEALAEALRGVDMQVSGVEEKPYTRRPYAPFM
TSTLQQEAGRKLHYTSDRTMRIAQRLYENGHITYMRTDSTSLSEQGLTAAREQARELYGD
AFVADSPRRYDRKSKNSQEAHEAIRPAGERFATPGELHGQLDAEEFKLYELIWQRTVASQ
MSDAKGTSLKVTIAGTARTGEQTEFSATGRTITFPGFLRAYVETSRLEDGRDVADNAEKR
LPNLSEGDPLKATDVSADGHATNPPARYTEASLVKKMEELGIGRPSTYASIIKTIQDRGY
VVPRGNALVPSWVAFAVVGLLEENFTPLVDYDFTSSMEDELDNIAAGEEDRTEWLTGFYF
GDAEADDNTAESIARHGGLKALVGENLEHIDARAVNSLHLFDDEEGRPVFVRVGRYGPYI
ERRVGETAEGEPEYQRANLPESTTPDELNLELAEKLFATPQGGRELGLNPANGRMVVAKE
GRYGPYVTEIVRDDERATAEAAAEEIVAQERAEEDAQRAADGMRPKNWGTKTAAAQKEKR
INALVEENLKPGTASLFASMEPATVTLEDALKLLSLPREVGVDPADNEIITAQNGRYGPY
LKKGTDSRSLSTEDQIFTITLDEARRIYAEPKRRGRAAAQPPLKMLGDNDVSGKPMSVKD
GRFGPYVTDGTTNASLRKGDSPETITDARANELLSERRAKEAADGGTSARKATKKTTKKT
TKKTTAKKTTRKAPSPGTKRVIKAGTRKK
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaagcgaagggaccggggaagaccctggtcattgtggagtcgtcgaccaaggcg
aagaagatccagccctacctgggcgacggctatatcgtcgaggcctcggtcggccacatc
cgtgacctgccacgcggcgccgccgatgtgcccgcgaagtacaagaaggaaccgtgggcc
cgcctcggcgtcgacacggagaacggtttcgcccctctctacgtggtcagccccgacaag
aagaagaaggtcgcggacctccgggcgaagctgaagctctgcgacgagctcctgctggcc
actgaccccgaccgtgagggcgaggccatcgcctggcacctgctcgaggtgctcaagccg
acggtgccggtgcgccgcatggtgttcaacgagatcaccaagcccgccatcctggcggcc
gccgagaacacccgtgacctggacgagaacctcgtcgacgcgcaggagacccgccgcatc
ctcgaccgtctctacggttacgaggtctccccggtgctgtggaagaaggtcatgccgcgt
ctgtcggccggccgtgtccagtcggtggccacccgcgtcatcgtcgagcgggagcgtgag
cgcatggcgttcatctccgccgagtactgggatctcagcgtcgacctggacacgggtgcc
acccgggccgcggccgacccggacaacccgacctccttccaggcgaagctggcgaccctc
gacggccgtcgcgtcgcccagggccgtgacttcgacgaccgtggccggctcaagggtgag
gcggtggtcgtcggcaggcagcaggcggaggcgctggcggaggcgctgcggggcgtcgac
atgcaggtgtccggcgtggaggagaagccctacacgcgccgcccctacgccccgttcatg
acgtcgaccctccagcaggaggccggtcggaagctgcactacacctcggaccgcacgatg
cgtatcgcgcagcgtctgtacgagaacggccacatcacctacatgcgtaccgactcgacc
tcgctctccgagcagggtctcaccgcagcccgcgagcaggcccgtgagctctacggcgac
gccttcgtggcggactccccgcgccgctacgaccgcaagtccaagaactcgcaggaggcc
cacgaggcgatccgccccgcgggtgagcgtttcgccaccccgggtgagctgcacggacag
ctcgatgccgaggagttcaagctctacgagctgatctggcagcgcaccgtcgcctcgcag
atgtcggacgcgaagggcacctcgctgaaggtgaccatcgcgggcaccgcccgcaccggt
gagcagaccgagttctccgccaccggccgcaccatcacgttcccgggtttcctccgcgcc
tacgtggagacctcccgtctggaggacggccgcgacgtcgccgacaacgccgagaagcgt
ctgccgaacctctccgagggtgatccgctgaaggccaccgacgtctccgcggacggccac
gcgacgaacccgccggcccgctacaccgaggccagcctggtcaagaagatggaggagctg
ggtatcggccgtccgtcgacctacgcctcgatcatcaagaccatccaggaccgcggctac
gtcgtgccccgcggcaacgcgctcgtgcccagttgggtggcgttcgcggtggtcgggctg
ctggaggagaacttcaccccgctcgtcgactacgacttcacctcctcgatggaggacgag
ctcgacaacatcgccgccggcgaggaggaccgcaccgagtggctcaccggcttctacttc
ggcgacgccgaggcggacgacaacaccgccgagtccatcgcccgccacggtggcctgaag
gcgctcgtcggtgagaacctcgagcacatcgacgcccgcgcggtgaactccctgcacctt
ttcgacgacgaggagggacgccccgtcttcgtccgtgtcggccgttacggtccgtacatc
gagcgccgggtcggcgagaccgccgagggggagccggagtaccagcgtgcgaacctgccg
gagtcgacgaccccggacgagctcaacctcgagctggcggagaagctcttcgccaccccg
cagggtggccgcgagctgggtctcaacccggccaacggccgcatggtcgtggcgaaggag
ggccgttacggcccgtacgttaccgagatcgtgcgtgacgacgagcgcgccaccgccgag
gccgccgccgaggagatcgtcgcgcaggagcgtgccgaggaggacgcgcagcgtgccgcc
gacggcatgcgccccaagaactggggaaccaagaccgcggccgcgcagaaggagaagcgc
atcaacgccctggtcgaggagaacctcaagccgggcaccgcctccctcttcgcctccatg
gagccggcgaccgtcacgctcgaggacgccctcaagctgctcagcctgccgcgtgaggtg
ggcgtcgaccccgccgacaacgagatcatcaccgcgcagaacggccgctacggcccgtac
ctgaagaagggcacagactcgcgttccctgtccaccgaggaccagatcttcaccatcacc
ctggacgaggcgcgtcgcatctacgcggagccgaagcgtcgcggccgcgccgccgcacag
ccgccgctgaagatgctcggcgacaacgacgtctccggcaagccgatgtccgtcaaggac
ggccgcttcggtccctacgtcaccgacggtacgaccaacgcgtcgctgcgcaagggtgac
agcccggagacgatcaccgacgcccgtgccaacgagctgctctctgagcggcgcgcgaag
gaggccgccgacggcggtacctccgcacgcaaggccacgaagaagacgaccaagaagacc
accaagaagacgaccgccaagaagaccacccgcaaggccccctccccggggaccaagcgc
gtgatcaaggccggcacccgcaagaagtag
DBGET
integrated database retrieval system
