Corynebacterium humireducens: B842_04060
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Entry
B842_04060 CDS
T03576
Name
(GenBank) putative RNA polymerase sigma factor
KO
K22468
polyphosphate kinase [EC:
2.7.4.34
]
Organism
chm
Corynebacterium humireducens
Pathway
chm00190
Oxidative phosphorylation
chm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chm00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
B842_04060
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B842_04060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chm03019
]
B842_04060
Enzymes [BR:
chm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.34 GDP-polyphosphate phosphotransferase
B842_04060
Messenger RNA biogenesis [BR:
chm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B842_04060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPK2
6PF2K
SPOUT_MTase_2
Rod_CreS
Motif
Other DBs
NCBI-ProteinID:
AJE32665
UniProt:
A0A0B5D1D8
LinkDB
All DBs
Position
809093..809956
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AA seq
287 aa
AA seq
DB search
MAKKDTADQTPTPKPKKLDNKAYEKELKRLQAELVDMQQWVVETGARVVVIMEGRDAAGK
GSAIKRITQYLNPRSARIEALPAPSSREQGQWYFQRYVEKLPTAGEIVIFDRSWYNRAGV
ERVMGFCTSQEYRRFLHQAPIFERLLVEDGILLRKYWFSVSDEEQIARFQSRLEDPLRRW
KLSPMDLQSITRWEDYSRAKDEMFIHTDIPSAPWYTVESEDKKRSRINVIAHLLSTIPYE
KIDRPLPQIPNRPESDNGYERPPRAEFRYVPDVASKLAVPKRKKNKK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaggacaccgctgaccagactccgacaccgaaaccgaagaagctggacaac
aaggcctacgagaaggagctcaagaggctccaggccgagctggtggacatgcagcagtgg
gtcgtcgagaccggtgcgcgtgtcgtcgtcatcatggagggccgtgacgccgccggcaag
gggtccgcgatcaagcggatcacccagtacctcaacccccgttccgcacgcatcgaggcg
ctgcccgccccgagctcccgcgagcaggggcagtggtacttccagcgttacgtcgagaag
ctgccgaccgccggcgagatcgtgatcttcgaccgttcctggtacaaccgggcgggcgtc
gagcgcgtcatgggtttctgcacgtcgcaggagtaccgccgcttcctccaccaggcaccg
atcttcgagcgtctgctcgtcgaggacggcatcctcctgcgcaagtactggttctccgtc
tccgacgaggagcagatcgcgcgtttccagtcgcgtctggaggatccgctgcgccgctgg
aagctctcgccgatggatctgcagtccatcacccgttgggaggactactcccgtgcgaag
gacgagatgttcatccacacggacatcccctccgccccgtggtacacggtggagagcgag
gacaagaagcgttcccgcatcaacgtgatcgcccacctgctgtcgacgatcccctacgag
aagatcgaccgcccgctgccgcagatcccgaaccgcccggagtccgacaacggctacgag
cgtccgccgcgcgccgagttccgttacgtcccggacgtcgcgagcaagctcgccgtgccg
aagcggaagaagaacaagaagtag
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