Corynebacterium humireducens: B842_09670
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Entry
B842_09670 CDS
T03576
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
chm
Corynebacterium humireducens
Brite
KEGG Orthology (KO) [BR:
chm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chm03016
]
B842_09670
Enzymes [BR:
chm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
B842_09670
Transfer RNA biogenesis [BR:
chm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
B842_09670
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GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
AJE33783
UniProt:
A0A0B5DCA1
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All DBs
Position
complement(1994479..1995012)
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AA seq
177 aa
AA seq
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MKRLFSTLLLPEEAREHLVHALRPIRENNPRDLRWTDPDNWHITLSFYGLMPNDHTDLLQ
HLAQAAASSGPLDLHLHGAGSFGHRSLWIGVGGDTARLKALMADAVYNPEEPPPPQKPHV
TIARTQERWLVGDLVHALLVYDGPRFVCDELALVESHLGQGRSGGPRYEVLERVRLG
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagactcttctcgacactgctcctcccggaggaggcacgcgaacacctcgtgcac
gccctgcgccccatccgggagaacaacccccgcgacctgcggtggaccgaccccgacaac
tggcacatcacgctgagcttctacgggctcatgcccaacgaccacaccgacctgctgcag
cacctggcgcaggccgctgcctcctccgggcccctggacctccacctgcacggtgccggc
tccttcggtcaccgctccctgtggatcggcgtcggtggtgacaccgcccggttgaaggca
ctgatggccgacgccgtctacaacccggaggaacccccgccgccgcagaaaccgcacgtg
accatcgcccggacgcaggaacgctggctggtcggggatctggtccatgccctgctggtc
tacgacggtccgcgtttcgtgtgcgatgagctggccctcgtggagtcgcatctcggccag
ggtcgctcgggtggccccaggtacgaggtcctggagcgggtccgactgggttag
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