Corynebacterium halotolerans: A605_09085
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Entry
A605_09085 CDS
T02472
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
chn
Corynebacterium halotolerans
Pathway
chn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A605_09085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chn03400
]
A605_09085
Enzymes [BR:
chn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A605_09085
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A605_09085
DNA repair and recombination proteins [BR:
chn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A605_09085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Auto_anti-p27
DUF7573
Motif
Other DBs
NCBI-ProteinID:
AGF72819
UniProt:
M1MYM0
LinkDB
All DBs
Position
complement(1980309..1981145)
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AA seq
278 aa
AA seq
DB search
MPELPEVEVVRRGLADHVLGATFHGVEVLHPRANRGQEVPLAVLLDGARIDAVRRRGKYL
WLDLGEDSALFVHLGMSGQMLVGEPGTCTSKHLRIRAALTASDARELELAFVDQRTFGRW
LHTDTVDGIPLPVAHIARDPLEPDFDPVAVARRIRTKKSPVKSVLLDQTVVSGIGNIYAD
ESLWAARVKPTRRAASLRQGDVVTLLAAAREVMERALESGGTSFDALYVNVNGASGYFSR
SLNVYGREGQPCPRCGTPIRRVAFANRSTHYCPTCQVL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaagtcgaggtcgtccgccgcggcctcgccgaccacgtcctgggt
gcgaccttccacggcgtggaggtgctgcacccgcgcgccaaccgcgggcaggaggtaccc
ctggcggtgctgctcgacggcgcgcggatcgacgccgtgcgccggcgcgggaagtacctg
tggctggacctgggggaggactccgcgctgttcgtccacctcggcatgagcgggcagatg
ctcgtcggcgaacccggcacctgcacctcgaaacacctgcgcatccgcgccgcgctgacc
gcctcggacgcccgggaactggagctggcgttcgtcgaccagcgcaccttcggccggtgg
ctgcacaccgacacggtcgacggcatcccgctgcccgtggcgcacatcgcccgcgatccg
ctggagcccgacttcgacccggtggccgtggcgcggcggatccgcacgaagaagtcaccg
gtgaagtccgtgctgctggaccagacggtggtctccggcatcggcaacatctacgccgat
gaatccctctgggcggcacgcgtcaagcccacacgccgggccgccagtctgcgccagggc
gacgtcgtcacgctgctggccgccgcgagggaggtcatggagcgcgcgctcgagtccggc
ggaaccagctttgacgcgctctacgtcaacgtcaacggggcgtcgggctacttctcccgt
tcgctcaacgtctacggccgggaggggcagccctgcccgcgctgcggcaccccgatccgg
cgcgtggccttcgccaaccggtccacgcactactgcccgacctgccaggtcctctga
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