Corynebacterium halotolerans: A605_10965
Help
Entry
A605_10965 CDS
T02472
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
chn
Corynebacterium halotolerans
Pathway
chn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A605_10965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chn03019
]
A605_10965
03009 Ribosome biogenesis [BR:
chn03009
]
A605_10965
Enzymes [BR:
chn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
A605_10965
Messenger RNA biogenesis [BR:
chn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A605_10965
Ribosome biogenesis [BR:
chn03009
]
Prokaryotic type
rRNA processing factors
A605_10965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
AGF73193
UniProt:
M1NP87
LinkDB
All DBs
Position
complement(2412702..2416712)
Genome browser
AA seq
1336 aa
AA seq
DB search
MADSTASNNDPQNPEGGDVAKNADATDVTGNTAAESAEQPRKRRATRSSGTGATKKTTRK
TTRKTSGKTTPTPGDDAPAAEGPAPEATDVTGNTAAESAEQPRKRRATRSSGTKATKKTG
KKTTGAAAQTMEGPDADSSVEQAVQATAATGTAESTDAVGTAAPTGQPKKNTRRGGRRNA
GTDAKMANPSADSTVTADPVAERAAGDADTRKKTKRAVKRATPGTTPAPAAETTPAADFD
RGRLGEKTRVHVLAKALGMTSRDLIVALDALGIVKVAQSSLSRAEAERLLDALAAGDTPQ
APAAETVTAEEPAGDQAEDQAEDQAEDQATGEATQQQGGEPVEKIRTRVRKNVANEIHQI
EEKVEADLAAAIEEQGDSELLEDITPEITPKPETAEDTAAQFVPLFMAPKQTRTAPAATT
DSTETGDAGTADATGAGDTPDGGEAASRRRRRGRRGASRGRGAEDARGQEQRDVDTHDLD
TPTADRTQDADTADGEDLPEEPVALKGSTRLESQKRRRAEMREEGRKKRHIVTQAEFLAR
RESVERTMVVRERQRHDHPGLVTQVGVLEDDLLVEHFVTSETQASMIGNIYLGRVQNVLP
SMEAAFIDIGKDRNGVLYAGEVDWKSTGLGGRSRRIEQALKSGDQVLVQVTKDPVGHKGA
RLTTQISLAGRYLVYVPGGRSAGISRKLPGPERKRLKEILGRVVPGQGGAIIRTAAENVP
EEAIAADVNRLHRLWEDVQNAAQKEKDSKGAKPVTMYEEPDMLVKVVRDLFNEDFSALIV
DGDRAWKTVHAYVKAVAPDLLDRVQKYDRAAHGDRDAFEQFRVDEQLQKALARKVWLPSG
GTLIIERTEAMTVIDVNTGKFTGSGGNLEETVTRNNLEAAEEIVRQMRLRDIGGMIVVDF
IDMVLPENQDLVLRRLTEALGRDRTRHQVSEVTSLGLVQMTRKRLGTGLLETFSTECEHC
AGRGLILHDDPVEEQPERAEHEERGPRRGRRRPRPEQEPGRPPAAAATQRDDAPKAPAVS
SDSDIEELAASVIVAGGSEDSDDRADRAETGDTGRSRDGKGRKGQRGREERDDQRRSPRR
GSRGRGRGRSRDDEHTSDLEEIVSAAVDLAAETDPDEPSAANLVPQHTGRTADVTEDPVD
DEPDIELAPTGEKSFQQAVADWERSPRRRRRTRGNSRSDHRPNPEDFAQAPTEPVADWVE
PGAAKEDDEVGKATDKSADRPRGGQRDERADGRREDGSSRRRGRRRTTTRSEPRAGEPAQ
ERPAQEQAAKEQAGRRGRRRAVRRTMAQPDVEKQRPQDRSPAAGKQRKSEPEQAAESTPK
GSGRGRRRVVRRTSSS
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
gtggctgattccactgcatccaataacgatccccagaatccggaaggcggggacgtcgcg
aagaacgccgacgccaccgacgtcaccggaaacaccgccgcggagtccgccgagcagccc
aggaagcgccgcgccacccgcagctcgggcaccggggcgacgaagaagacgacacggaag
accacacgcaagacttccgggaagaccaccccgacgccgggcgacgacgcccccgccgca
gagggaccggcccccgaagccaccgacgtcaccggaaacaccgccgcggagtccgccgag
cagcccaggaagcgccgcgccacccgcagctcgggcaccaaggcgacgaagaaaaccggg
aagaagaccacgggcgcggccgcccagaccatggagggcccggacgccgactcctcggtc
gagcaggccgtgcaggccaccgccgccacggggaccgcggaatccaccgacgccgtcggg
acggccgccccgaccgggcagccgaagaagaacacccgccgcggcggccgccggaacgcc
ggcacagacgcgaagatggccaacccctccgccgactccaccgtgaccgccgatccggtc
gccgagcgcgccgccggtgacgcagacacgcggaagaagaccaagcgcgcggtcaagcgc
gccactccgggcaccactccggcgcccgccgccgagaccaccccggccgccgacttcgac
cgcggccggctcggggagaagacccgcgtccacgtgctggccaaggccctcgggatgacg
tcccgcgacctcatcgtcgccctcgacgcgctgggcatcgtcaaggtcgcccagtcctcg
ctcagccgcgccgaggccgagcgcctgctcgacgccctcgccgccggcgacaccccgcag
gcccccgccgcagaaaccgtcaccgcggaggagccggccggggatcaggccgaggaccag
gccgaggaccaggccgaggaccaggccacgggggaggccacacagcagcagggcggggag
ccggtggagaagatccgcacccgcgtgcgcaagaacgtcgccaacgagatccaccagatc
gaggagaaggtcgaggcggatctcgccgccgccatcgaggaacagggcgacagtgagctg
ctggaggacatcaccccggagatcaccccgaagcccgagaccgcggaggacaccgccgcc
cagttcgtgcccctgttcatggcgccgaagcagaccaggacggccccggccgcgaccacc
gacagcactgagaccggagacgccggcaccgccgacgccaccggggccggcgacaccccc
gacggtggggaggccgcttcccgacgccgccgccgtggccgccgtggcgccagccgcgga
cgtggcgccgaggacgcccgcgggcaggagcagcgcgacgtcgacacgcacgacctcgac
acgcccaccgccgaccgcacccaggacgctgacaccgccgacggcgaggacctgccggag
gagccggtggccctgaagggctcgacccgcctggagtcccagaagcgccgtcgcgccgag
atgcgcgaggagggccgcaagaaacgtcacatcgtcacccaggctgagttcctggcccgc
cgcgagtccgtggagcgcaccatggtcgtgcgcgagcgccagcgccacgaccacccgggc
ctggtgacccaggtgggtgtcctggaggacgacctgctcgtcgagcacttcgtgacctcg
gagacgcaggcctcgatgatcggcaacatctacctcgggcgcgtgcagaacgtactgccc
agcatggaggccgcgttcatcgacatcggcaaggaccgcaacggggtgctctacgccggc
gaggtcgactggaagtccaccgggctgggcgggcgcagccgccgcatcgagcaggcgctg
aagtccggcgaccaggtgctcgtccaggtcaccaaggacccggtcggccacaagggggcg
cgcctgaccacgcagatctccctggcgggccgctacctggtctacgtgccgggcggccgt
tcggcgggtatctcccgcaagctgcccgggccggagcgcaagcggctcaaggagatcctg
ggccgggtcgtgcccgggcagggtggggcgatcatccgcaccgccgccgagaacgtgccc
gaggaggccatcgcggcggacgtcaaccgcctgcaccgcctgtgggaggacgtccagaac
gccgcgcagaaggagaaggactccaagggcgcgaagccggtgaccatgtacgaggagccg
gacatgctcgtcaaggtcgtccgcgacctgttcaacgaggacttctccgcgctgatcgtc
gacggcgaccgggcctggaagaccgtgcacgcctacgtgaaagccgtcgccccggacctg
ctggaccgggtacagaagtacgaccgcgcggcccacggtgaccgggacgccttcgagcag
ttccgcgtggacgagcagctgcagaaggcgctcgcccgcaaggtctggttgccgtcgggt
ggcaccctgatcatcgaacgcaccgaggcgatgaccgtcatcgacgtcaacaccggcaag
ttcaccggctcgggcggcaacctcgaggagacggtcacccgcaacaacctcgaggccgcc
gaggagatcgtccgccagatgcgcctgcgtgacatcggcggcatgatcgtcgtcgacttc
atcgacatggtcctgcccgagaaccaggatctcgtcctgcggcgcctgaccgaggcgctc
ggccgcgaccgtacccgccaccaggtctccgaggtcacctcgctcggtctggtgcagatg
acccgcaagcgcctgggcaccggactgctggagaccttctccaccgagtgcgagcactgc
gccggccgcggtctcatcctccacgacgatccggtcgaggagcagcccgagcgcgccgag
cacgaggaacgtggcccgcgccgcggccgccgtcgcccccggccggagcaggagccgggg
cgccccccggcggccgccgccacgcagcgtgacgacgcccccaaggcgcccgccgtcagc
tccgacagcgacatcgaggagctcgcggcctccgtcatcgtcgcgggcggcagcgaggac
tccgacgacagggccgaccgggccgagaccggggacaccggccgttcccgcgacgggaag
ggccggaagggccagcggggccgcgaggagcgggacgatcagcgccgttccccgcgccgg
ggcagtcgcggccgcggccggggccgctcccgggacgatgagcacaccagcgacctggag
gagatcgtctccgccgctgtggacctggccgccgagaccgacccggacgagccgtcggcc
gccaacctcgtgccgcagcacaccggccgcaccgccgacgtgaccgaggacccggtcgac
gacgagcccgacatcgagctcgccccgacgggggagaagtccttccagcaggcggtcgcc
gactgggagcgctccccgcgccggcgccgccgtacccgcggcaactcccgttccgaccac
cgcccgaaccccgaggacttcgcccaggccccgaccgaaccggtcgccgactgggtggag
ccgggcgcggcgaaggaggacgacgaggtcgggaaggccacggacaagtcggcggaccgg
ccccggggcgggcagcgcgatgagcgtgccgacggccgccgggaggacggttcctcccgc
cgccgaggccgccgccgcaccactacccgcagcgagccccgcgccggggaaccggcacag
gagcggcccgcgcaggagcaggccgcgaaggagcaggcgggacgccgcgggcgtcgccgc
gcggtacgtcggacgatggcccagccggacgtcgagaagcagcggccgcaggaccgcagc
ccggcggccgggaagcagcggaagtccgagccggagcaggccgcggagtcgacgccgaaa
gggtccggcaggggccgtcgccgagtggtgcgtcgcacgtcgtcgtcctga
DBGET
integrated database retrieval system
