Corynebacterium halotolerans: A605_13605
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Entry
A605_13605 CDS
T02472
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
chn
Corynebacterium halotolerans
Pathway
chn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A605_13605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chn03400
]
A605_13605
Enzymes [BR:
chn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A605_13605
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A605_13605
DNA repair and recombination proteins [BR:
chn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A605_13605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AGF73717
UniProt:
M1NW57
LinkDB
All DBs
Position
3034838..3035650
Genome browser
AA seq
270 aa
AA seq
DB search
MPEGHVIHRLAAELNSDFTGQDLTVTSPQGRFAAEAALLDGHRIAHAEAVGKHLFVDFDI
DHPEHIVYIHLGLIGSLRFEPSEDVWGQIRLRIDNGATAANLRGPQWCRLVTDAERDAVV
AKAGEDPIRADADPEQLRPRIARSRRSIGSLLMDQKLYAGVGNIYRAETLFRLGISPFRP
GNQLTDAEFDSIWADLVGLMAIGVERGRIDTVRDEHTPEAMGRAPRKDDHGGEVYVYRRA
GQPCYLCGTPITEQVMEGRNLFWCPTCQAD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaggtcacgtcatccaccgtctcgccgccgaactcaacagcgatttcaccgga
caggatctgaccgtgacctccccgcagggccggttcgccgcggaagcggccctcctggac
ggtcaccgcatcgcgcacgccgaggccgtcggcaagcatctgttcgtcgacttcgacatc
gaccaccctgagcacatcgtctacatccacctgggcctgatcggctcgctgcgcttcgaa
ccgagcgaagacgtgtgggggcagatccgcctgcgcatcgacaacggggccacggccgcg
aacctgcgggggccgcaatggtgccgcctggtcaccgacgccgagcgggacgcggtcgtc
gccaaggcgggcgaggatcccatccgcgccgacgccgacccggagcagctccggccgagg
atcgcgcgcagccgccgcagcatcggctccctgctcatggaccagaagctctacgccggg
gtgggaaacatctaccgcgcggagaccctcttccgcctcggcatctcgcccttccggccc
gggaatcagctgaccgacgccgagttcgactcgatctgggcggatctggtcggcctgatg
gccatcggcgtggagcgcggtcgcatcgacaccgtccgcgacgagcacaccccggaggcc
atgggccgcgcacctcgcaaggacgaccacggcggcgaggtctacgtctaccgccgcgcc
gggcagccctgttatctctgcggcaccccgatcaccgagcaggtgatggagggccgcaac
ctcttctggtgcccgacctgtcaggcggattga
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