KEGG   Cryptosporidium hominis: Chro.30175
Entry
Chro.30175        CDS       T00210                                 
Name
(RefSeq) replication factor c subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cho  Cryptosporidium hominis
Pathway
cho03030  DNA replication
cho03410  Base excision repair
cho03420  Nucleotide excision repair
cho03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Chro.30175
   03410 Base excision repair
    Chro.30175
   03420 Nucleotide excision repair
    Chro.30175
   03430 Mismatch repair
    Chro.30175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cho03032]
    Chro.30175
   03036 Chromosome and associated proteins [BR:cho03036]
    Chro.30175
   03400 DNA repair and recombination proteins [BR:cho03400]
    Chro.30175
DNA replication proteins [BR:cho03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Chro.30175
  DNA Replication Termination Factors
   ELG1-RFC complex
    Chro.30175
Chromosome and associated proteins [BR:cho03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Chro.30175
DNA repair and recombination proteins [BR:cho03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Chro.30175
  Check point factors
   HRAD17(Rad24)-RFC complex
    Chro.30175
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_16 AAA_14 RuvB_N Rad17 AAA_22 AAA_5 Mg_chelatase nSTAND3 AAA_19 bpMoxR AAA_3 AAA_11 NTPase_1 AAA_30 TniB AAA_7 AAA_28 AAA_24 RNA_helicase NPHP3_N Viral_helicase1 MCM AAA_18 DNAX_ATPase_lid MeaB FtsK_SpoIIIE DUF815 ABC_tran Sigma54_activ_2 KTI12 AAA_25 ATPase_2 IstB_IS21 SecA_DEAD DUF2247
Other DBs
NCBI-GeneID: 3412212
NCBI-ProteinID: XP_667804
LinkDB
Position
3
AA seq 327 aa
MSTQIWIEKYRPKILDEMVGNEEVLTRLKVLAKHGNMPNLLLSGPPGTGKTTSIHCLASE
MLGSKYGRAVLELNASDDRGIDVVRDKIKSFAREKIDLPEGRHKIVILDEVDSMTDSAQQ
ALRRLMEVYSESTRFALACNQSTKIIEPIQSRCAIIRYSKLTDAQIRKRLFEIIKMENIP
YVDSGIDTLVFTADGDMRIVINNLQATYHGFSMVSRDNVLKVSDIPSPEKIKSILDSCVK
CNWRLAHSIVEELFIGGYSPLDIVITMRNVLKKYQLPERAILEYLKEVGRCHFVMLDGCA
TPLQLDKLLGQLCMISARCGLNSNKTN
NT seq 984 nt   +upstreamnt  +downstreamnt
atgtcaacccaaatttggatagaaaaatatcgcccaaagattttggatgaaatggttggt
aatgaagaagttttaactcgattaaaagtcttagccaagcatggtaatatgccgaatcta
cttctttctggtcctccaggaacaggaaagactactagtattcactgtctggcttctgaa
atgcttggaagtaaatatggtagagctgttctagaattaaatgcatcagatgaccgtgga
attgatgttgttagagacaagatcaagagttttgcaagagagaaaattgacttacctgaa
ggaaggcacaaaattgtaatactggacgaagtagacagtatgacagactcagcacagcaa
gctctcagaagactaatggaagtttactcagaaagtacccgttttgctctagcttgtaat
caatcaacaaaaattatagagccaatccaaagtagatgcgcaattattaggtactcaaag
cttacagatgcacaaatcagaaaaagattatttgagattatcaagatggagaacattcca
tacgttgattctggaattgacactcttgtatttactgcagatggagatatgagaattgta
attaacaatctccaagcaacttaccatggattttctatggtttctagagataatgtactc
aaagtctccgacattccctctcctgagaaaattaagagtattttggactcttgtgttaaa
tgtaactggagattagctcactccattgttgaagaactttttattgggggttactcacca
cttgatattgtcattaccatgagaaatgtattgaaaaaatatcaactccctgaaagggcc
attttggagtacctaaaagaggttgggagatgccactttgtcatgcttgatggttgtgcc
acccccttacaattagacaaacttcttggccaattgtgtatgatttctgctagatgtggt
ttaaattcaaataagaccaactaa

DBGET integrated database retrieval system