Cryptosporidium hominis: Chro.70079
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Entry
Chro.70079 CDS
T00210
Name
(RefSeq) DEAH-box RNA helicase
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
cho
Cryptosporidium hominis
Pathway
cho03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Chro.70079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cho03041
]
Chro.70079
Enzymes [BR:
cho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Chro.70079
Spliceosome [BR:
cho03041
]
Complex C
Other components
Step II factors
Chro.70079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
AAA_19
T2SSE
SLFN-g3_helicase
Flavi_DEAD
AAA_30
SRP54
nSTAND3
ResIII
Sigma54_activ_2
AAA_16
AAA_7
NB-ARC
AAA_25
Motif
Other DBs
NCBI-GeneID:
3412940
NCBI-ProteinID:
XP_666235
LinkDB
All DBs
Position
7
AA seq
813 aa
AA seq
DB search
MRQRFWELQNSKIGALISSDKSHSIEENSIYPQDGPKEGEYENSKQSFGDLFRKSKDISE
NSQNTSNNLNEFLDPENDSRQRMLMTRRSLPVYKVRDSLIKLIGEHMVVVVVGETGSGKT
TQLTQYLHEFGYSKRGIIGCTQPRRVAAVSVAQRVADEMNVGLGKEVGYTIRFEDFTSKS
TVIKYMTDGVLMRESLSDPELERYSAIIMDEAHERSLNTDVLFGIFRSVLSNRRDFRLIV
TSATMDSEKLSSFFGNAPIFNIPGRTFPVEIEYLRYFPDDYIDAAVRQCLKIHCTNPLSL
LENKDNSDKKQKKDGDILIFMTGQEDIEATCILISEKLENLMIDGADPLMILPIYSQLPS
DLQAKIFKPSPYRKVIVATNIAETSLTLDGIRYVIDCGLCKVKVYNPKIGMDSLQITPIS
QANASQRSGRAGRVSSGICYRMYTEQTFLADMLPNSVPEIQRTNLSNVVLLLKSLGSEDV
FSFPFIDPPSSSSISTSLYQLWSLGALDDNGSLTDLGRQMARFPLDPPLSKVLLTANKLD
CLIEAIVVVAMLTVPSIFYRPKDRLEEADASREKFSIPESDHLTLLNIFIQWKRHGSNLR
WSERHFLHQKALIRVEEVFNQIVEIYSNIMSMETIPRIDWKPNPLCWDNLRKAFCSGYFH
NSARIRAIGQYVNLSTSVPTYIHPSSSLFLSGVNPDYLIYHEVIITSKEYMNAVSAIEPE
WLNFYAPHIFKLNINDSNKEDLLSLNDPSQINDQKPDLEEPENLMNVFRENDLKVDVQSL
SAFENSQQEVFDRSSRKIRSKNNKHALSFSFGE
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagacaaagattctgggaattgcaaaactctaaaattggagcactcatttcctcagat
aaatcccattctatagaggagaactctatttatccccaagatggacccaaagaaggcgaa
tatgaaaattccaaacaaagttttggagatttatttagaaaaagcaaagatatttctgaa
aatagtcaaaataccagtaacaatttaaatgaatttctggaccctgaaaatgattcaagg
caaagaatgttaatgactagacgaagccttccggtatataaagttagggattcacttata
aagcttattggagaacatatggtggttgtagttgttggagaaactggaagtggaaaaact
actcaattaactcaatatctccatgaatttggttatagtaaacgtggaattatcggatgt
acccaaccaagaagggtagctgctgtaagtgtagcacaaagagttgcagatgagatgaat
gtgggtttaggaaaagaagttggctatactatcagatttgaagattttacaagtaaatcc
actgttattaaatatatgacggatggtgttttgatgagggaaagcttaagtgatccagaa
cttgaacgttatagtgctattataatggatgaggctcatgaaagaagtcttaatactgat
gtactttttggtatatttagaagtgttttatcaaatagaagagattttagattaatagta
acttcagctacaatggattctgaaaaactgtcttcattttttggtaatgctccaatattt
aatattcctggccgaacatttccagtagaaattgaataccttagatattttccagatgat
tatattgatgctgcagtaagacaatgcttgaagattcactgtactaatccattaagcctt
ttagaaaataaggataattcagataaaaagcagaaaaaagatggggatattttgatattt
atgacaggtcaggaagacattgaagctacatgtattcttatatcagagaaattagagaat
ctaatgatcgatggagctgatccacttatgattttacctatatattcacaattaccttca
gatttacaagcaaagatatttaaaccaagtccttatagaaaagtaattgtagcaacaaat
attgcagaaacttcacttactttggatggtattagatatgttatagattgtggactttgc
aaagtcaaagtatataatccaaaaataggtatggattctcttcaaattactccaattagt
caagccaacgcatcacaaagaagtggtagagctggaagagtatcttctggaatatgctat
agaatgtatacagaacagacttttttagcagatatgcttccaaatagtgttcccgagatc
caaagaacgaatttatcaaatgtcgtattattattgaaatcattaggatctgaagatgtt
ttctcatttccatttatagatcctccctcatcttcttcaatttcaacatctttatatcag
ctctggtctttgggagctttagatgataatggatctttaacagatcttgggagacaaatg
gctagatttcctttagatcctccattatcaaaagttttactaacagctaataaactagat
tgtttaattgaagcaattgtagttgttgcaatgctcacagttccaagtattttctatagg
cctaaagatagacttgaagaggctgatgcttctagagagaagttttcaataccagaaagt
gaccatttaactcttttaaatatttttatccaatggaaaagacatggatcaaatttaagg
tggtcagaaagacattttttacatcagaaagcattaatacgtgttgaagaagtatttaat
cagattgttgaaatttattcaaatataatgagtatggagactattcctaggattgattgg
aagccaaatcctttatgttgggacaatcttagaaaagcattttgcagtggatattttcat
aattctgcaagaatacgagcaattggacagtatgtaaatctttcaacctctgttccaact
tatattcacccatcaagttcactctttctttcaggagtaaacccagactatttaatttat
catgaagtaattataacttcaaaggaatatatgaatgcagtctctgctatagaacctgag
tggcttaatttctatgcacctcacatttttaagctaaacattaacgactctaacaaggag
gatttgctttctttaaatgacccctcacaaataaatgatcaaaaacctgatttagaagag
ccagagaatcttatgaatgttttcagagaaaatgacttgaaggtagatgttcaaagctta
tcggcttttgagaattcacaacaagaggtttttgacagatcatcaagaaagattagaagc
aaaaataacaagcatgcactttcatttagttttggagaatga
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