Cryptosporidium hominis: Chro.70509
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Entry
Chro.70509 CDS
T00210
Name
(RefSeq) replication protein A 70kDa
KO
K07466
replication factor A1
Organism
cho
Cryptosporidium hominis
Pathway
cho03030
DNA replication
cho03420
Nucleotide excision repair
cho03430
Mismatch repair
cho03440
Homologous recombination
cho03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Chro.70509
03420 Nucleotide excision repair
Chro.70509
03430 Mismatch repair
Chro.70509
03440 Homologous recombination
Chro.70509
03460 Fanconi anemia pathway
Chro.70509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cho03000
]
Chro.70509
03032 DNA replication proteins [BR:
cho03032
]
Chro.70509
03400 DNA repair and recombination proteins [BR:
cho03400
]
Chro.70509
Transcription factors [BR:
cho03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Chro.70509
DNA replication proteins [BR:
cho03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Chro.70509
DNA repair and recombination proteins [BR:
cho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Chro.70509
MMR (mismatch excision repair)
Chro.70509
DSBR (double strand breaks repair)
HR (homologous recombination)
Chro.70509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
OB_MEIOB_N
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
3413779
NCBI-ProteinID:
XP_666551
LinkDB
All DBs
Position
7
AA seq
686 aa
AA seq
DB search
MFDNGSPLSIRLVMSDATQLQPGDMIKITRFSLNEIHSTKLVTVVQYDKVGHWSGFTSIG
KATPHPCMGSSKAAGGGPGDQKQPGVQNQMGASSSTPNSSHSTEPSSVSMQQQQQHNIQM
QPQQVGYRASGPSEQMPGSAGPISGRDGMQSSGPGSMNMGNMRSGPYGGGGMGSGQSKGP
VSRNQEIPVYPIKNITSYLHRWRIVGRVVSKSDIRKFSSSKTKEGKVFSFEICDADGSEI
RATCFTKAVDKFYDVLKEGEVYSFSRGDVKEANTRFNTTGHEFEIIFNEDAEIQSLPQDD
RIPKKTFNFVPISEIRGYSKGQSLDLLGILLKAGPITTITVKSTGADTQKRELTIIDKSG
HSIDLTLWSERTHLDEGLISQNPVIAVKNAIVEEFNGFRLKLGSSSSIEWNPSGVEQSQE
LKNWFFSQSNLHESVVSLSSSSPSPGNTNSNSSAKRLSIDEIVATATSGSSSSDMLDGGI
WVHTYGTIRSIRDNKYYWSSCPKCKRKVTEIEDPNSINALVLPYGSEKETSTSLGPNYHC
PSCQQSIENPIKKYILSCEIVDSTGTIRAVAFAEHGETIMDGLSPEKLESLKENTDKNTE
DCFSDKLFSEWVFKLNGKKELYQDSEIIKYRIFSAEDMTNPEILNREAKRKLEYIYDKLN
NIKETNTSSNAYSAVKVGMGFGQFGY
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatggttctccgttgagcataaggctggtaatgtcggatgctactcagtta
caaccaggagatatgattaagataacaagattttctttgaatgagatccattccaccaag
ttggttactgttgttcagtacgacaaagttggacattggtcaggatttacttctattgga
aaggctactccgcatccatgtatggggtccagcaaggctgcagggggaggtccaggggac
cagaagcagcctggagttcaaaatcagatgggagcttcatcaagcactccaaattcaagt
cattcaactgagccaagcagcgtcagtatgcaacagcaacaacaacacaatattcagatg
cagccacaacaagttggatacagagcgagcgggccatcagaacaaatgccaggatccgca
ggacccatttcaggtagagatggcatgcaatcctcagggccaggctctatgaatatgggt
aatatgagaagtggtccatacggaggaggtggaatgggttcaggccagtcaaagggtcca
gtttcgaggaatcaggaaattccagtgtatccaataaagaacataacttcgtatctacac
aggtggagaattgttggccgtgtagtgagcaaaagcgatatcagaaagttctcatcatcc
aagacaaaggaaggcaaagtgttttcattcgagatttgtgacgctgatgggagcgagatc
agggcaacatgttttaccaaagccgttgataaattctatgatgtgctgaaagagggggaa
gtatatagtttctcaagaggagatgtcaaagaagcaaatactcgttttaatactacaggg
catgaatttgaaataatcttcaacgaagatgcagaaattcaaagtttgccacaggatgat
cggatcccaaagaagacctttaattttgttcctatttcagaaatccggggctattccaag
ggccaatccctggatcttttgggcattttgctcaaagctgggccaattacaacaattacc
gttaagtctactggcgcagatacccagaaaagagaactaacaatcattgataagtctggc
catagcattgacttgaccttgtggtcagaaaggacccacttagatgagggcctcatttct
cagaacccagttattgctgttaaaaatgccattgttgaggagtttaatggatttagattg
aaattgggatcaagctcttccattgaatggaacccttctggagttgaacaatctcaggaa
ctcaagaattggttcttctcccagtcaaatttacacgagtcagttgtttcgctctcgtcc
tctagtccaagtcctggaaacactaactcaaattcctcagccaaaaggcttagtattgat
gaaattgtagctactgctacttctgggtctagctcgtctgatatgctcgatggagggatt
tgggttcacacttatggaactataaggtcaattcgtgataataagtactactggagtagc
tgccctaaatgtaagagaaaagttactgaaatcgaagatcctaacagtattaacgctttg
gtgttgccttatgggtcagaaaaggagactagtacatctctcgggccaaactatcactgt
ccaagttgccagcagtccattgaaaaccctattaaaaagtacatcttgagttgtgagatt
gttgactctacaggaacaatcagagccgtagcttttgcagaacatggagaaaccataatg
gatggtctttcaccagaaaaacttgaatctcttaaagagaatacagataaaaatactgag
gattgcttctctgataaactctttagtgagtgggtctttaaattgaatggaaaaaaagaa
ctctatcaggactctgagataattaagtaccgaatcttttcagctgaagatatgacaaat
ccagaaatcctaaacagagaagccaaaagaaagctcgagtatatttatgacaagcttaat
aatattaaggaaactaatactagtagcaatgcttatagtgctgttaaagtcggtatggga
tttggacagtttggatattga
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