Cryptosporidium hominis: Chro.80448
Help
Entry
Chro.80448 CDS
T00210
Name
(RefSeq) helicase
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
cho
Cryptosporidium hominis
Pathway
cho03013
Nucleocytoplasmic transport
cho03015
mRNA surveillance pathway
cho03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Chro.80448
09122 Translation
03013 Nucleocytoplasmic transport
Chro.80448
03015 mRNA surveillance pathway
Chro.80448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cho03019
]
Chro.80448
03041 Spliceosome [BR:
cho03041
]
Chro.80448
Enzymes [BR:
cho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Chro.80448
Messenger RNA biogenesis [BR:
cho03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Chro.80448
Spliceosome [BR:
cho03041
]
Complex C
Other components
EJC/TREX
Chro.80448
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Chro.80448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Utp25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
3414300
NCBI-ProteinID:
XP_668053
LinkDB
All DBs
Position
8
AA seq
427 aa
AA seq
DB search
MSVQNTEELVDYEEEETTTRIEEESRADEGSKVGRGNYVAIHASGFRDFFLKPELIRAIG
DAGFEHPSEVQHETIPHAITGVDILCQAKSGMGKTAVFVLSILQQLNPDEESKNVECICI
GHTRELAFQVKNEFDRFSKYLKNVKPQVVYGGIPIQKDIDMLSNSTPNILIGTPGRIIAL
IRQKKLVTEGIAHFVLDECDKCLESLDMRKDVQEIFMSTPRKKQVMMFSATMTKEIRDVC
RKFMQNPVEIFVDDETKLTLHGLLQYYVKLGESEKNRKLNDLLDQLEFNQVIIFVKSVSR
AQALHKLLTECSFPSICIHAALSQQERISRYQQFKNFEKRIMVATDLFGRGIDIERVNIV
INYDMPENTDSYLHRVGRAGRFGTKGLAITMVSSQTDSQVLNDVQSRFEVNIAEMPNQID
TSSYINQ
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaaaatactgaggaattagtagactatgaagaggaggagactacaacaaga
attgaggaggagtctagagcggatgagggatctaaggtgggtagaggtaattatgtagct
attcacgcctccggattcagggactttttcttaaagcctgaattaattagagccataggt
gatgcagggtttgagcatccttctgaggtgcagcatgagacaattccccatgctatcaca
ggtgttgacattttatgtcaagctaaatcgggaatgggaaagacagcagtttttgtattg
tcgatcctccagcagttaaatcctgatgaagagagtaagaatgttgaatgcatttgcatt
ggacatactagggagttagctttccaggtgaagaatgagtttgatagattttcaaaatac
ctcaagaatgtgaagcctcaggtagtttatggaggcatccccatacaaaaggatatagat
atgctttcaaactctacaccaaatattttgattggtacgcctggaagaataattgcgtta
atcagacagaagaagttagtgactgagggtattgctcattttgttttggatgaatgcgac
aaatgtctagagtctcttgatatgagaaaagatgtccaagagatcttcatgagtactcca
agaaagaagcaggtaatgatgttcagtgctacaatgacaaaggagattagagatgtatgc
agaaagtttatgcagaatcctgttgagattttcgttgatgacgagacaaaattgacatta
catggtttactacaatactatgtaaagttgggtgaatctgaaaaaaatagaaagcttaat
gatttacttgaccaattagagtttaaccaggtgattatctttgtcaagagtgtttctaga
gcccaagcactccataagcttcttacagaatgtagctttccatcaatttgtattcatgca
gctcttagccagcaggaaagaatttcaagataccaacaattcaaaaactttgagaaaaga
attatggtagcaaccgacttatttggaagaggtattgatattgaaagagtaaatattgta
attaattacgatatgccagagaatacagattcttatcttcatagagtcggaagagccggt
agatttggtacaaaaggtcttgcaattaccatggtctcttctcaaactgactctcaagta
ctcaacgacgtgcagagtagattcgaagtcaacattgctgaaatgccaaatcagattgat
acttcctcatatatcaatcaatga
DBGET
integrated database retrieval system
