Cryptosporidium hominis: Chro.80453
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Entry
Chro.80453 CDS
T00210
Name
(RefSeq) MutS 2-related
KO
K08735
DNA mismatch repair protein MSH2
Organism
cho
Cryptosporidium hominis
Pathway
cho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Chro.80453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cho03400
]
Chro.80453
DNA repair and recombination proteins [BR:
cho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Chro.80453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
AAA_27
DUF2884
AAA_29
Motif
Other DBs
NCBI-GeneID:
3414298
NCBI-ProteinID:
XP_668048
LinkDB
All DBs
Position
8
AA seq
847 aa
AA seq
DB search
MNNTIDINFKTRTFCSIVAKQTITEPKLGISLFDVNSGLISVANIEDNEQLSELESLLVR
TQPSNVVYSVQKDCLSLKRLRNVLDMNNNWTCEEIEFPKSSTVEDFEVIISPLLRRPCSN
YGKELESELIRQSLLNLIRHFQLVQSKENNSQCEIKFLVTKTFMRMDSACVQSLRIFPSK
GESSKASTNLFGLLNKTRTKVGARRLEQWLRQPLIDEKQIISRQDVVEFFCKNDFLRQKL
YGIHMRKVCDLDQIAVRFRTFASLMASESSKSEREAKFGLEDMVKLYDSVMQSGNIFSDI
KDALEENKNSDSSPSFVQSVYDLILVPLESTLNRFKDYIRLVEKTIDLEEADKGNYLIIP
YFTPELEKLSEEKNRIQCKIEAHRKDLDAYLCRERGYNEGSREAVRVIRGEGADTSLCFR
VTRRDIEYFQDKKRFKQVRINKNDYIFRTNELMDLSDREERVIKEYNNEQEQVLVKALSV
ASTYWSLVSRLAGILGSIDVLLSFSMTSLCAQIPFVRPKMVNGECNLATEMKISEDGSTN
CNCRFYCKELRHPLIEAQGTVSTTGQFVANDVELHRHGNLLSIITGPNMGGKSTYIRQIA
ICSLLAQIGCFVPAQEAQIPIMDQLMCRVGASDAQILGISTFFAEMIEASAILRSATERT
LVIVDELGRGTSTFDGFGLAWSIASYLVSEKKCYTLFATHFHELSSLASSTPNVTNLRVT
ASTSKVPSLSKQGSGVLKFLYKVEKGFTDKSLGVDVAELSGLPSETVKRSREKAEELTLV
EQIYVAPQSCQNKKRLQLINVASNIKSSLEAVLNSAESCSDSNLFKEATLNSIQNLRELL
NITVASC
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatacaattgatataaattttaaaactcgaactttctgctcgattgttgcaaaa
cagacaattactgaaccaaaacttgggatttctctttttgatgtaaacagtggattaatt
tcagtagcaaatatagaagataatgaacagctttctgaattagagtctttacttgtaagg
actcagccaagtaatgtagtttactcagttcagaaagattgtttaagcttaaagcgttta
cgtaatgtactagatatgaacaataattggacatgcgaagaaattgagttcccaaaatca
tctactgttgaagattttgaagtcataatttctcctttattaaggaggccatgcagcaat
tatgggaaggagttagaaagtgaattgattagacagtcattgcttaacttaataagacat
tttcagttagtccagtctaaagagaataactctcagtgtgaaattaagttccttgtaact
aaaactttcatgagaatggactctgcctgtgttcaatcattaaggatctttccaagcaag
ggagaaagtagtaaggcatcaacaaatttatttgggttactgaacaaaactagaactaag
gttggtgctagaagacttgaacaatggctaagacaacctcttattgatgagaaacagatc
atttcacgtcaagatgttgtagaattcttttgtaagaatgacttcttacgtcagaaactg
tatggtattcatatgcgtaaagtttgcgatttagatcaaatagctgtccgatttaggaca
tttgcttctttaatggcttctgaaagctcaaaatctgagagagaagcaaagttcggttta
gaggatatggtcaagttgtatgatagtgtaatgcaatcaggaaatattttttctgatata
aaagatgcattggaggaaaataagaactcagattcttctccaagttttgttcagtcagta
tatgacctaattcttgtaccattggagtcaacattgaacagatttaaagactatatccga
ttagttgaaaagaccattgatcttgaagaagcggacaaaggtaactacttaattattccg
tactttaccccagaacttgaaaagctttcagaagaaaagaataggatacaatgtaaaatc
gaggcccacaggaaggatttggatgcatatctctgcagagaacgtggatataatgaaggg
tctagagaggctgttagagttataagaggagaaggagctgatacaagtctttgttttaga
gtcactaggagggacatagaatattttcaagataagaagcgatttaaacaggttagaata
aacaagaatgattatatttttaggacaaacgagctaatggacctttcagatcgtgaagaa
agagttataaaagaatataataatgagcaagagcaagtacttgtaaaggctttatctgta
gcttctacttattggtctttggtttctcggcttgcaggtattttggggtcaattgacgtg
cttttaagcttttcaatgacgtctttatgcgcccagattccatttgtaaggcctaaaatg
gtcaatggggaatgcaatttggcaactgaaatgaaaatctcggaggatggatccactaat
tgtaattgccgattttactgcaaggaacttcgtcacccattaattgaagcccaaggaaca
gtttctactactggccagtttgttgcgaatgatgttgaacttcaccgtcatgggaattta
ttgagtataataacaggcccaaatatgggtggaaaatcaacctatattcgccaaattgct
atttgttccttactggcccaaataggatgctttgttcctgctcaagaagcacagatacct
ataatggatcaattaatgtgtagagttggcgcttctgatgcgcaaatacttggaatttct
accttctttgctgaaatgattgaggcgtctgcaattctaaggagtgcaacggagcgaact
ttggttatagttgatgaactagggcgtggtacatcgacctttgatggatttggcctcgca
tggtccattgcaagttatcttgttagtgagaaaaaatgttatactctttttgctactcat
tttcatgagctcagttcgcttgcatctagtaccccaaatgtaactaatttaagagtaaca
gcatctacatctaaagtaccatctctttctaaacaaggaagtggagttctaaagttctta
tacaaagttgaaaaaggattcacggacaagtctttaggagttgatgttgcagaactttct
ggcctcccttcagaaactgtcaagagatcgagggaaaaggctgaagaactaactttggtc
gaacaaatctacgtagcccctcaaagctgtcaaaacaaaaagaggcttcagttgattaat
gttgcttccaatataaagtcaagtcttgaagccgtcttgaactcagcagagtcttgctct
gattctaatttattcaaagaagcaacattaaattcaattcagaatcttagggaattacta
aatataacggttgcttcctgttaa
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