Chondrocystis sp. NIES-4102: NIES4102_06650
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Entry
NIES4102_06650 CDS
T05085
Name
(GenBank) DNA binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
chon
Chondrocystis sp. NIES-4102
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chon03032
]
NIES4102_06650
03036 Chromosome and associated proteins [BR:
chon03036
]
NIES4102_06650
03400 DNA repair and recombination proteins [BR:
chon03400
]
NIES4102_06650
DNA replication proteins [BR:
chon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NIES4102_06650
Chromosome and associated proteins [BR:
chon03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NIES4102_06650
DNA repair and recombination proteins [BR:
chon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NIES4102_06650
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Transposase_mut
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
BAZ43664
LinkDB
All DBs
Position
complement(747982..748260)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKGELVDRISQKATVTKKQADAVLSAAIETIMEAVSEGDKVTLVGFGSFERRERKEREG
RNPKTGEKMSIPATKVPAFSAGKLFKDKVAPK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaggtgaattagtcgatcgcatttctcaaaaagcaactgtaactaaaaaacaa
gctgatgctgtgctttcggctgcaattgaaacaattatggaagccgtatctgagggagat
aaagttaccctagtaggatttggctcttttgaaagacgtgagcgcaaggaaagagaagga
cgtaatcctaaaacaggagaaaaaatgtctattcctgctaccaaagtacctgctttctcg
gctggaaaactattcaaagataaagtagctcccaaatag
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