Chondrocystis sp. NIES-4102: NIES4102_09270
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Entry
NIES4102_09270 CDS
T05085
Symbol
ycf84
Name
(GenBank) hypothetical protein
KO
K11720
lipopolysaccharide export system permease protein
Organism
chon
Chondrocystis sp. NIES-4102
Pathway
chon02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
chon00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NIES4102_09270 (ycf84)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chon02000
]
NIES4102_09270 (ycf84)
Transporters [BR:
chon02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
NIES4102_09270 (ycf84)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
BAZ43924
UniProt:
A0A1Z4RN90
LinkDB
All DBs
Position
complement(1053216..1054388)
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AA seq
390 aa
AA seq
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MKIGAFKIFERQSMGLSVMNLYIIKELFFPFLFGMGIFTSLGLSIGAVFDLIRKVTDSGL
LWGVAVKILILRMPEFIVLAFPMSILLATLMAYSRLSSDSELIALRSIGVSLYRLILPAI
AFSLCIVAITFFFNNFVAPAANYQASLTLKQALGQTRPDFATDNILFDEYAEVKTEDGNT
KEVLTRLFYAEQFDGQQMKNLTVLDRSRRNVSQIVTARSAQWNIRENIWDFYDGTIYLIS
NEGSYDNVIRFQHQQLALPKTALEITSEGKQTDEMNIFEARKYLETIKPYADEQRIRKWQ
VRIQEKIAIPFACLVFAIIGTALGVKPQNSGKATSFGICIGLIFAYYLLSFISQSLGISG
ILPPSVAAWLPNFLGLGGAFGLLAQTVEQG
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcggcgcattcaaaatatttgagcgacaaagtatgggcttatcggtgatgaat
ctctacatcatcaaagagttatttttcccatttttatttggcatggggatatttacttca
ttaggtttatccatcggtgcagtttttgatctaattcgcaaagtaaccgactcaggatta
ttgtggggagtggcggttaaaattctaattttaagaatgcctgaatttattgttttggct
tttccgatgtcaattttactggcaactttaatggcttatagtcgtctttcgagcgatagt
gaattgattgcactgcgtagtattggagttagcctttatcgtttaattttacctgcgatc
gcttttagtttatgtatagtagctatcacttttttctttaataattttgttgctcctgct
gctaattatcaagcttctcttaccctcaaacaagcactaggtcaaactcgccctgatttt
gcaacagataatattttatttgatgaatatgcggaggttaaaaccgaggatggtaacact
aaagaagtcctaacaagattattttacgccgaacaatttgacggtcaacaaatgaaaaac
ctcacggtgttagatcgctcccgtcgtaacgttagtcagattgttacagcgcgatcggct
caatggaatattcgcgagaatatctgggatttttatgatggcacaatttatttaattagt
aatgaaggtagttatgacaatgtaatacggtttcaacatcaacaattggctttaccaaaa
acagctttggaaattaccagcgagggaaaacaaactgatgaaatgaatatctttgaggct
agaaaatatcttgagacaattaaaccctatgcggatgagcaaagaattcgtaagtggcaa
gttcgtattcaggaaaaaattgctattccttttgcctgtttggtttttgccataattggt
actgcattaggagttaaaccccaaaactcaggtaaggctactagctttgggatttgtatc
ggattgatttttgcttactatttactctcttttatctctcagtctttgggaatatctggt
attcttcctccctcggttgcagcctggttacccaattttttgggtttaggtggagcattt
gggttattagctcaaacagttgagcagggttaa
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